RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 CEP104O60308 925 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 FGGP02679 453 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 GRIA1P42261 906 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 DPP6P42658 865 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 CCT8P50990 548 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 SIM1P81133 766 aaPredicted RBP12.03□□□□□ -0.48
SCFD1-201ENST00000311943 ALG11Q2TAA5 492 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 PNCKQ6P2M8 343 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 USP45Q70EL2 814 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 GPR26Q8NDV2 337 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 OR1E3Q8WZA6 343 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 SPOCK2Q92563 424 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 NUS1Q96E22 293 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 DTD2Q96FN9 168 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 FICDQ9BVA6 458 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 RIOK2Q9BVS4 552 aaKnown RBP12.03□□□□□ -0.48
SCFD1-201ENST00000311943 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.03□□□□□ -0.48
SCFD1-201ENST00000311943 LIASO43766 372 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 MTX2O75431 263 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 ITGAVP06756 1048 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 TPH1P17752 444 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 XRCC4Q13426 336 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 ARHGEF7Q14155 803 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 DEFB133Q30KQ1 61 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 DOK6Q6PKX4 331 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 HEATR4Q86WZ0 1026 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 CCDC97Q96F63 343 aaPredicted RBP12.03□□□□□ -0.48
SCFD1-201ENST00000311943 FCRL5Q96RD9 977 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 AP1M1Q9BXS5 423 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 ZDHHC5Q9C0B5 715 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 AMACRQ9UHK6 382 aa12.03□□□□□ -0.48
SCFD1-201ENST00000311943 OAS3Q9Y6K5 1087 aaKnown RBP12.03□□□□□ -0.48
SCFD1-201ENST00000311943 MYLKQ15746 1914 aa12.02□□□□□ -0.48
SCFD1-201ENST00000311943 LOC285095A0A1B0GVY8 99 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 PIAS2O75928 621 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 JUNDP17535 347 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 STC1P52823 247 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 THOP1P52888 689 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 OASLQ15646 514 aaKnown RBP12.02□□□□□ -0.49
SCFD1-201ENST00000311943 RAET1GQ6H3X3 334 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 MARK2Q7KZI7 788 aaKnown RBP12.02□□□□□ -0.49
SCFD1-201ENST00000311943 HID1Q8IV36 788 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 CALR3Q96L12 384 aaKnown RBP12.02□□□□□ -0.49
SCFD1-201ENST00000311943 ALS2CR12Q96Q35 445 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 LRRC61Q9BV99 259 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 GBA3Q9H227 469 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 FAM153AQ9UHL3 310 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 MOSPD1Q9UJG1 213 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 ZNF711Q9Y462 761 aa12.02□□□□□ -0.49
SCFD1-201ENST00000311943 HACD1B0YJ81 288 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 IFNB1P01574 187 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 RABIFP47224 123 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 TRIP13Q15645 432 aaPredicted RBP12.01□□□□□ -0.49
SCFD1-201ENST00000311943 TRIP6Q15654 476 aaKnown RBP12.01□□□□□ -0.49
SCFD1-201ENST00000311943 KHDC1Q4VXA5 237 aaKnown RBP12.01□□□□□ -0.49
SCFD1-201ENST00000311943 PRRT3Q5FWE3 981 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 RALGPS1Q5JS13 557 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 SEL1L2Q5TEA6 688 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 TTC27Q6P3X3 843 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 IL27RAQ6UWB1 636 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 BZW1Q7L1Q6 419 aaKnown RBP12.01□□□□□ -0.49
SCFD1-201ENST00000311943 IQCHQ86VS3 1027 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 PARGQ86W56 976 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 CDKL3Q8IVW4 592 aaPredicted RBP12.01□□□□□ -0.49
SCFD1-201ENST00000311943 TXLNBQ8N3L3 684 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 TRIM58Q8NG06 486 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 BAHD1Q8TBE0 780 aaPredicted RBP12.01□□□□□ -0.49
SCFD1-201ENST00000311943 BLOC1S5Q8TDH9 187 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 LMX1AQ8TE12 382 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 ASB12Q8WXK4 309 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 AP2M1Q96CW1 435 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 IFT43Q96FT9 208 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 SPATA13Q96N96 652 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 TMPRSS11EQ9UL52 423 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 CNOT6Q9ULM6 557 aaKnown RBP12.01□□□□□ -0.49
SCFD1-201ENST00000311943 ARL5AQ9Y689 179 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 LRP4O75096 1905 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 SIGLEC6O43699 453 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 FOXD2O60548 495 aaPredicted RBP12.01□□□□□ -0.49
SCFD1-201ENST00000311943 NDST3O95803 873 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 CSF2P04141 144 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 CYP2A6P11509 494 aaPredicted RBP12.01□□□□□ -0.49
SCFD1-201ENST00000311943 TSHRP16473 764 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 ADRA1AP35348 466 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 TRIM23P36406 574 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 RXRGP48443 463 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 FOXC1Q12948 553 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 MSLNQ13421 630 aaPredicted RBP12.01□□□□□ -0.49
SCFD1-201ENST00000311943 SLC1A5Q15758 541 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 DENND5AQ6IQ26 1287 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 PHACTR4Q8IZ21 702 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 CHCHD4Q8N4Q1 142 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 PDCD7Q8N8D1 485 aaKnown RBP12.01□□□□□ -0.49
SCFD1-201ENST00000311943 PRELID2Q8N945 189 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 DENND6BQ8NEG7 585 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 ZNF548Q8NEK5 533 aaPredicted RBP12.01□□□□□ -0.49
SCFD1-201ENST00000311943 TMEM168Q9H0V1 697 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 CARD9Q9H257 536 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 LAMA5O15230 3695 aa12.01□□□□□ -0.49
SCFD1-201ENST00000311943 LY6G6EA0A0G2JKS1 128 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms