RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CACNB4O00305 520 aaPredicted RBP15.48■□□□□ 0.07
HCFC1-201ENST00000310441 C9P02748 559 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 USP17L7P0C7H9 530 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 KCNA5P22460 613 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 ALDH4A1P30038 563 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 FAAP100Q0VG06 881 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 ZNF567Q8N184 647 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 ZKSCAN4Q969J2 545 aaPredicted RBP15.48■□□□□ 0.07
HCFC1-201ENST00000310441 AP2M1Q96CW1 435 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 ZFP14Q9HCL3 533 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 ZNHIT2Q9UHR6 403 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 TOP3BO95985 862 aaKnown RBP15.48■□□□□ 0.07
HCFC1-201ENST00000310441 MIPP30301 263 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 ORC1Q13415 861 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 RSPH9Q9H1X1 276 aaPredicted RBP15.48■□□□□ 0.07
HCFC1-201ENST00000310441 ATXN3LQ9H3M9 355 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 NTRK1P04629 796 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 LPOP22079 712 aaPredicted RBP15.48■□□□□ 0.07
HCFC1-201ENST00000310441 SVOPLQ8N434 492 aa15.48■□□□□ 0.07
HCFC1-201ENST00000310441 CELF6Q96J87 481 aaKnown RBP15.48■□□□□ 0.07
HCFC1-201ENST00000310441 ACKR2O00590 384 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 PEPDP12955 493 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 PRKAG1P54619 331 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 GPR107Q5VW38 600 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 PHYKPLQ8IUZ5 450 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 MREGQ8N565 214 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 ALLCQ8N6M5 410 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 RAD51AP1Q96B01 352 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 ATG4CQ96DT6 458 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 MROH2AA6NES4 1674 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 ADH1CP00326 375 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 CD2P06729 351 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 PAN2Q504Q3 1202 aaKnown RBP15.47■□□□□ 0.07
HCFC1-201ENST00000310441 DOK6Q6PKX4 331 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 TRNT1Q96Q11 434 aaKnown RBP15.47■□□□□ 0.07
HCFC1-201ENST00000310441 COLEC10Q9Y6Z7 277 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 FER1L4A9Z1Z3 1794 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 DDX3YO15523 660 aaKnown RBP15.47■□□□□ 0.07
HCFC1-201ENST00000310441 LIPEQ05469 1076 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 TMEM17Q86X19 198 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 EFCAB3Q8N7B9 438 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 SEMA6BQ9H3T3 888 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 MKLN1Q9UL63 735 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 PCDHGB7Q9Y5F8 929 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 RIC1Q4ADV7 1423 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 TRMUO75648 421 aaKnown RBP15.47■□□□□ 0.07
HCFC1-201ENST00000310441 RLN2P04090 185 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 LAPTM5Q13571 262 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 RAB11FIP2Q7L804 512 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 UBR7Q8N806 425 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 TESCQ96BS2 214 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 PCDH12Q9NPG4 1184 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 OAS3Q9Y6K5 1087 aaKnown RBP15.47■□□□□ 0.07
HCFC1-201ENST00000310441 CHRNA5P30532 468 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 TROAPQ12815 778 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 FAM153CQ494X1 144 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 FAM91A1Q658Y4 838 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 SLITRK4Q8IW52 837 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 CYP4X1Q8N118 509 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 RNF148Q8N7C7 305 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 SLC2A14Q8TDB8 520 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 POP1Q99575 1024 aaKnown RBP15.47■□□□□ 0.07
HCFC1-201ENST00000310441 NEUROD4Q9HD90 331 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 ZNF639Q9UID6 485 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 HPSEQ9Y251 543 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 IFNA7P01567 189 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 TBC1D10AQ9BXI6 508 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 MFSD1Q9H3U5 465 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 ASAH2Q9NR71 780 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 TRIM17Q9Y577 477 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 PLOD2O00469 737 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 MTHFRP42898 656 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 ADGRG6Q86SQ4 1221 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 FCRL4Q96PJ5 515 aa15.47■□□□□ 0.07
HCFC1-201ENST00000310441 ZBTB22O15209 634 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 GJA8P48165 433 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 PNLIPRP1P54315 467 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 RPL38P63173 70 aaKnown RBP15.46■□□□□ 0.07
HCFC1-201ENST00000310441 HSPA14Q0VDF9 509 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 SLC5A9Q2M3M2 681 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 ZNF662Q6ZS27 426 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 ZNF34Q8IZ26 560 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 SGCDQ92629 289 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 TBC1D3BA6NDS4 549 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 TLX3O43711 291 aaPredicted RBP15.46■□□□□ 0.07
HCFC1-201ENST00000310441 NADKO95544 446 aaPredicted RBP15.46■□□□□ 0.07
HCFC1-201ENST00000310441 CYP17A1P05093 508 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 RPP38P78345 283 aaKnown RBP15.46■□□□□ 0.07
HCFC1-201ENST00000310441 PCDHGB1Q9Y5G3 927 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 TFECO14948 347 aaPredicted RBP15.46■□□□□ 0.07
HCFC1-201ENST00000310441 TPD52L2O43399 206 aaKnown RBP15.46■□□□□ 0.07
HCFC1-201ENST00000310441 KRT36O76013 467 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 S100A12P80511 92 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 TTC29Q8NA56 475 aaPredicted RBP15.46■□□□□ 0.07
HCFC1-201ENST00000310441 C1GALT1C1Q96EU7 318 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 GPRC5CQ9NQ84 441 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 GAKO14976 1311 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 HTR7P34969 479 aa15.46■□□□□ 0.07
HCFC1-201ENST00000310441 ARCN1P48444 511 aaKnown RBP15.46■□□□□ 0.07
HCFC1-201ENST00000310441 EIPR1Q53HC9 387 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms