RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ELMO3Q96BJ8 720 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 PPP1R16AQ96I34 528 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 MARCH7Q9H992 704 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 SLC35C2Q9NQQ7 365 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 TAS2R13Q9NYV9 303 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 EGFL7Q9UHF1 273 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 PSMD13Q9UNM6 376 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 TIMM13Q9Y5L4 95 aaPredicted RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 LAMB4A4D0S4 1761 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 PRR5-ARHGAP8B1AHC4 643 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 NT5C1B-RDH14C9J2C7 533 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 PEX11AO75192 247 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 C9P02748 559 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 VCLP18206 1134 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ACAT1P24752 427 aaKnown RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 NAGLUP54802 743 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ARHGAP8P85298 464 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 RBBP4Q09028 425 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 SGCGQ13326 291 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 IL18Q14116 193 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 RFX4Q33E94 735 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 SLC9A4Q6AI14 798 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ZC3H14Q6PJT7 736 aaKnown RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 FAM20CQ8IXL6 584 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 POMGNT2Q8NAT1 580 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 PDPRQ8NCN5 879 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 C18orf25Q96B23 403 aaPredicted RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 TAMM41Q96BW9 452 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 SLC47A1Q96FL8 570 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 DMRTB1Q96MA1 342 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ADGRE3Q9BY15 652 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 ELAC1Q9H777 363 aaKnown RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 POLMQ9NP87 494 aaPredicted RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 ETNK2Q9NVF9 386 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 DNAAF2Q9NVR5 837 aaKnown RBP8.19□□□□□ -1.1
VPS41-202ENST00000310301 PAPPAQ13219 1627 aa8.19□□□□□ -1.1
VPS41-202ENST00000310301 EDF1O60869 148 aaKnown RBP8.18□□□□□ -1.1
VPS41-202ENST00000310301 USP12O75317 370 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 UMPSP11172 480 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 ZNF12P17014 697 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 CYP2A7P20853 494 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 AMPD1P23109 780 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 UBXN2BQ14CS0 331 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 INAVAQ3KP66 663 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 CBWD3Q5JTY5 395 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 CBWD5Q5RIA9 395 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 ZNF549Q6P9A3 640 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 VSTM1Q6UX27 236 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 ARCQ7LC44 396 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 OR8H3Q8N146 312 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 PPP1R13LQ8WUF5 828 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 CDT1Q9H211 546 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 AHSPQ9NZD4 102 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 PCYOX1Q9UHG3 505 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 GMEB2Q9UKD1 530 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 HCN4Q9Y3Q4 1203 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 SAGE2PA6NJ88 616 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 E7ENX8 843 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 ABHD2P08910 425 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 FSHRP23945 695 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 PTPN5P54829 565 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 TPTEP56180 551 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 MYL6P60660 151 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 FNDC3BQ53EP0 1204 aaKnown RBP8.18□□□□□ -1.1
VPS41-202ENST00000310301 CXXC5Q7LFL8 322 aaKnown RBP8.18□□□□□ -1.1
VPS41-202ENST00000310301 CARNMT1Q8N4J0 409 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 TOP6BLQ8N6T0 577 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 USP7Q93009 1102 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 CLPTM1LQ96KA5 538 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 ACO2Q99798 780 aaKnown RBP8.18□□□□□ -1.1
VPS41-202ENST00000310301 DUSP9Q99956 384 aaKnown RBP8.18□□□□□ -1.1
VPS41-202ENST00000310301 RTKNQ9BST9 563 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 BCO2Q9BYV7 579 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 PRKD2Q9BZL6 878 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 ABCB9Q9NP78 766 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 FADS3Q9Y5Q0 445 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 EML1O00423 815 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 MAGEC1O60732 1142 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 SH3BGRLO75368 114 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 OR6A2O95222 327 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 CCNE2O96020 404 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 RBL1P28749 1068 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 MMP13P45452 471 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 OMPP47874 163 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 NRIP1P48552 1158 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 NR2C2P49116 596 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 HNMTP50135 292 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 TUBA3EQ6PEY2 450 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 TRIM48Q8IWZ4 208 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 TRPV1Q8NER1 839 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 PJA1Q8NG27 643 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 SERAC1Q96JX3 654 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 NPAS2Q99743 824 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 TTYH1Q9H313 450 aaPredicted RBP8.18□□□□□ -1.1
VPS41-202ENST00000310301 ALG9Q9H6U8 611 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 NKIRAS2Q9NYR9 191 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 LNPEPQ9UIQ6 1025 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 PCDHGA10Q9Y5H3 936 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 ARHGEF33A8MVX0 844 aa8.18□□□□□ -1.1
VPS41-202ENST00000310301 H3BNX3 289 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms