RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SHOC2Q9UQ13 582 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 HEATR9A2RTY3 570 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 EFCAB8A8MWE9 144 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 A8MX80 341 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 STX7O15400 261 aaKnown RBP17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 USP12O75317 370 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 HOXC4P09017 264 aaPredicted RBP17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 ZNF806P0C7X5 589 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 ETV3P41162 512 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 NPY2RP49146 381 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 C21orf59P57076 290 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 PTK2BQ14289 1009 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 C8orf74Q6P047 294 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 Q6ZVL8 140 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 MMGT1Q8N4V1 131 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 OXR1Q8N573 874 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 OR52K1Q8NGK4 314 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 AP2M1Q96CW1 435 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 APOL2Q9BQE5 337 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 ERP44Q9BS26 406 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 ZSCAN5AQ9BUG6 496 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 ARRDC1-AS1Q9H2J1 176 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 FAM83DQ9H4H8 585 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 EBF2Q9HAK2 575 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 SLC6A14Q9UN76 642 aa17.87■□□□□ 0.45
SSSCA1-201ENST00000309328 NUMA1Q14980 2115 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 KHNYNO15037 678 aaKnown RBP17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 DFNA5O60443 496 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 C1SP09871 688 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 KELP23276 732 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 MAOBP27338 520 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 SEMG2Q02383 582 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 CALCOCO2Q13137 446 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 MSLNQ13421 630 aaPredicted RBP17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 IRF4Q15306 451 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 WSCD2Q2TBF2 565 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 RNASEH2BQ5TBB1 312 aaKnown RBP17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 DENND2CQ68D51 928 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 TTC30BQ8N4P2 665 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 NAT8LQ8N9F0 302 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 STYXQ8WUJ0 223 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 KLK6Q92876 244 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 KLHDC7BQ96G42 594 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 SLC6A18Q96N87 628 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 IL17CQ9P0M4 197 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 RAPGEFL1Q9UHV5 662 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 APPL1Q9UKG1 709 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 COQ6Q9Y2Z9 468 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 SPO11Q9Y5K1 396 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 ANKRD36A6QL64 1941 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 ABCA7Q8IZY2 2146 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 SPAG17Q6Q759 2223 aa17.86■□□□□ 0.45
SSSCA1-201ENST00000309328 MYO15AQ9UKN7 3530 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 MAGEB16A2A368 324 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 TLR4O00206 839 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 RAD51CO43502 376 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 SEC31AO94979 1220 aaKnown RBP17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 CFIP05156 583 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 PIRTP0C851 137 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 GM2AP17900 193 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 ADRA1DP25100 572 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 HTR1BP28222 390 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 TRIM23P36406 574 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 DRG2P55039 364 aaKnown RBP17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 PFN3P60673 137 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 TUBB4BP68371 445 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 CAV1Q03135 178 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 CSRP2Q16527 193 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 SKIDA1Q1XH10 827 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 TRIM61Q5EBN2 209 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 HENMT1Q5T8I9 393 aaKnown RBP17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 PNCKQ6P2M8 343 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 GCNT7Q6ZNI0 430 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 PPHLN1Q8NEY8 458 aaKnown RBP17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 FAM129AQ9BZQ8 928 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 WDR26Q9H7D7 661 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 ERVMER34-1Q9H9K5 563 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 L2HGDHQ9H9P8 463 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 CAPN10Q9HC96 672 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 TMEM74BQ9NUR3 256 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 WHRNQ9P202 907 aa17.85■□□□□ 0.45
SSSCA1-201ENST00000309328 ATXN2Q99700 1313 aaKnown RBP17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 A0A1W2PR77 199 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 CACNB4O00305 520 aaPredicted RBP17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 YKT6O15498 198 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 IVDP26440 423 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 IGFALSP35858 605 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 SPAM1P38567 509 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 OLIG2Q13516 323 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 ITGA9Q13797 1035 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 POU6F1Q14863 301 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 DNAJC21Q5F1R6 531 aaKnown RBP17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 PCID2Q5JVF3 399 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 IZUMO3Q5VZ72 239 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 RAET1GQ6H3X3 334 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 ADAMTSL4Q6UY14 1074 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 PTAR1Q7Z6K3 402 aaPredicted RBP17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 TRAM1L1Q8N609 369 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 SERPINB12Q96P63 405 aa17.84■□□□□ 0.45
SSSCA1-201ENST00000309328 HINFPQ9BQA5 517 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms