RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 TBC1D4O60343 1298 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 PAGE1O75459 146 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 H6PDO95479 791 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 CHRNGP07510 517 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 OCM2P0CE71 109 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 OCMP0CE72 109 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 EN2P19622 333 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 CDH3P22223 829 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 YWHAQP27348 245 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 EPHA3P29320 983 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 HMOX2P30519 316 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 WDR5P61964 334 aaKnown RBP10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 IRF9Q00978 393 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 PSMD5Q16401 504 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 CES3Q6UWW8 571 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 DCDC5Q6ZRR9 648 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 ANKS3Q6ZW76 656 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 NECAB2Q7Z6G3 386 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 ZNF567Q8N184 647 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 TMEM151AQ8N4L1 468 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 HM13Q8TCT9 377 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 CHPT1Q8WUD6 406 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 USP13Q92995 863 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 PGAP3Q96FM1 320 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 CLSTN3Q9BQT9 956 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 TMEM175Q9BSA9 504 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 ACE2Q9BYF1 805 aaPredicted RBP10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 MRGBPQ9NV56 204 aa10.34□□□□□ -0.75
APOBEC3F-201ENST00000308521 E2F8A0AVK6 867 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 MAGEB16A2A368 324 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 TCAF2A6NFQ2 919 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 H3BNH8 94 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 VAPBO95292 243 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 PIGNO95427 931 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 F9P00740 461 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 ATF6P18850 670 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 GRIA4P48058 902 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 TRAP1Q12931 704 aaKnown RBP10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 ARL13AQ5H913 290 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 MON1AQ86VX9 555 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 TRIML2Q8N7C3 387 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 ZNF669Q96BR6 464 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 C8orf48Q96LL4 319 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 UHRF1Q96T88 793 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 C1QTNF1Q9BXJ1 281 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 CCSER2Q9H7U1 834 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 CASS4Q9NQ75 786 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 NDFIP2Q9NV92 336 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 GID8Q9NWU2 228 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 BFARQ9NZS9 450 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 MPP6Q9NZW5 540 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 GNPTGQ9UJJ9 305 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 AP4S1Q9Y587 144 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 MYOCOSA0A1B0GUC4 107 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 C7orf72A4D263 438 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 NEMP1O14524 444 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 DCLK1O15075 740 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 SEC24AO95486 1093 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 ELAVL2Q12926 359 aaKnown RBP10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 SEMA3BQ13214 749 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 OLIG2Q13516 323 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 PAFAH1B3Q15102 231 aaKnown RBP10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 C16orf59Q7L2K0 433 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 C14orf80Q86SX3 495 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 C11orf74Q86VG3 221 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 NTAN1Q96AB6 310 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 TMEM169Q96HH4 297 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 MAELQ96JY0 434 aaKnown RBP10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 FCRL2Q96LA5 508 aaPredicted RBP10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 SLC9A7Q96T83 725 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 YME1L1Q96TA2 773 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 TMEM106CQ9BVX2 250 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 PNPLA3Q9NST1 481 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 NSMCE4AQ9NXX6 385 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 IPO11Q9UI26 975 aaKnown RBP10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 ZDHHC2Q9UIJ5 367 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 SARDHQ9UL12 918 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 SCML2Q9UQR0 700 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 B3GNT3Q9Y2A9 372 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 MYRFQ9Y2G1 1151 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 TIMM22Q9Y584 194 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 TANC1Q9C0D5 1861 aa10.33□□□□□ -0.76
APOBEC3F-201ENST00000308521 BMP10O95393 424 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 AP2A1O95782 977 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 MSX2P35548 267 aaPredicted RBP10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 RHDQ02161 417 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 TRIM25Q14258 630 aaKnown RBP10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 ANO4Q32M45 955 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 C10orf120Q5SQS8 335 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 ISLR2Q6UXK2 745 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 ARHGAP36Q6ZRI8 547 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 LZTR1Q8N653 840 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 TTC16Q8NEE8 873 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 OR52K1Q8NGK4 314 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 RIN3Q8TB24 985 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 AGR3Q8TD06 166 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 STYXQ8WUJ0 223 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 TSNARE1Q96NA8 513 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 AGAP2Q99490 1192 aa10.32□□□□□ -0.76
APOBEC3F-201ENST00000308521 NUF2Q9BZD4 464 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms