RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 EYSQ5T1H1 3165 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 CEP290O15078 2479 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 TYW5A2RUC4 315 aaKnown RBP11.38□□□□□ -0.59
SCG2-201ENST00000305409 C2orf81A6NN90 581 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 LEFTY2O00292 366 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 MATN2O00339 956 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 CHUKO15111 745 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 TRIM24O15164 1050 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 RHOBTB1O94844 696 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 MYOGP15173 224 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 CDC25CP30307 473 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 CA5AP35218 305 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 PPM1AP35813 382 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 STC1P52823 247 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 OR4D1Q15615 310 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 TSNAXIP1Q2TAA8 658 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 LSM12Q3MHD2 195 aaKnown RBP11.38□□□□□ -0.59
SCG2-201ENST00000305409 LRRC73Q5JTD7 316 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 PPM1LQ5SGD2 360 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 SEL1L3Q68CR1 1132 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 FBXO46Q6PJ61 603 aaPredicted RBP11.38□□□□□ -0.59
SCG2-201ENST00000305409 PAQR3Q6TCH7 311 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 TAS2R42Q7RTR8 314 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 SDCCAG8Q86SQ7 713 aaPredicted RBP11.38□□□□□ -0.59
SCG2-201ENST00000305409 CATSPER2Q96P56 530 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 IL23AQ9NPF7 189 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 TCF7L2Q9NQB0 619 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 NLE1Q9NVX2 485 aaPredicted RBP11.38□□□□□ -0.59
SCG2-201ENST00000305409 MID2Q9UJV3 735 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 STOML2Q9UJZ1 356 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 INTS6Q9UL03 887 aaKnown RBP11.38□□□□□ -0.59
SCG2-201ENST00000305409 SLC4A7Q9Y6M7 1214 aa11.38□□□□□ -0.59
SCG2-201ENST00000305409 NCF1BA6NI72 391 aaPredicted RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 NCF1CA8MVU1 366 aaPredicted RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 UBXN8O00124 270 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 PER2O15055 1255 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 STX7O15400 261 aaKnown RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 PEX11AO75192 247 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 NIPSNAP2O75323 286 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 NDUFS3O75489 264 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 SRP72O76094 671 aaKnown RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 OLFM2O95897 454 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 FGBP02675 491 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 NCF1P14598 390 aaPredicted RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 ATP5F1P24539 256 aaPredicted RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 IRS1P35568 1242 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 PPP3CCP48454 512 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 LBX1P52954 281 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 PDAP1Q13442 181 aaKnown RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 RIPK1Q13546 671 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 RFTN1Q14699 578 aaPredicted RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 TAF1AQ15573 450 aaPredicted RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 PTPRNQ16849 979 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 CLEC6AQ6EIG7 209 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 KLC3Q6P597 504 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 LILRA6Q6PI73 481 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 LYSMD3Q7Z3D4 306 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 RDH11Q8TC12 318 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 TSPAN17Q96FV3 270 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 ABCG8Q9H221 673 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.37□□□□□ -0.59
SCG2-201ENST00000305409 LSM7Q9UK45 103 aaKnown RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 MED16Q9Y2X0 877 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 HDAC3O15379 428 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 IPO13O94829 963 aaKnown RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 SUPT7LO94864 414 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 ARHGEF15O94989 841 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 ALOX15P16050 662 aaPredicted RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 ITGB6P18564 788 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 LPOP22079 712 aaPredicted RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 FDXRP22570 491 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 CTNNB1P35222 781 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 POLD2P49005 469 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 SESN3P58005 492 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 PFKPQ01813 784 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 CBX2Q14781 532 aaPredicted RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 GABPB2Q8TAK5 448 aaPredicted RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 DTX3LQ8TDB6 740 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 SCG3Q8WXD2 468 aaKnown RBP11.37□□□□□ -0.59
SCG2-201ENST00000305409 ESAMQ96AP7 390 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 GPR21Q99679 349 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 C17orf80Q9BSJ5 609 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 TUBB6Q9BUF5 446 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 GPR63Q9BZJ6 419 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 LINC00597Q9H2U6 94 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 ABCB8Q9NUT2 735 aa11.37□□□□□ -0.59
SCG2-201ENST00000305409 GFRA2O00451 464 aa11.36□□□□□ -0.59
SCG2-201ENST00000305409 CD1DP15813 335 aa11.36□□□□□ -0.59
SCG2-201ENST00000305409 EN2P19622 333 aaPredicted RBP11.36□□□□□ -0.59
SCG2-201ENST00000305409 PRKAA1Q13131 559 aa11.36□□□□□ -0.59
SCG2-201ENST00000305409 MYO9BQ13459 2157 aa11.36□□□□□ -0.59
SCG2-201ENST00000305409 TEAD2Q15562 447 aa11.36□□□□□ -0.59
SCG2-201ENST00000305409 PFKFB4Q16877 469 aa11.36□□□□□ -0.59
SCG2-201ENST00000305409 SETMARQ53H47 684 aaPredicted RBP11.36□□□□□ -0.59
SCG2-201ENST00000305409 DGKKQ5KSL6 1271 aa11.36□□□□□ -0.59
SCG2-201ENST00000305409 FAM45BPQ6NSW5 357 aa11.36□□□□□ -0.59
SCG2-201ENST00000305409 FAM151BQ6UXP7 276 aa11.36□□□□□ -0.59
SCG2-201ENST00000305409 FRMD7Q6ZUT3 714 aa11.36□□□□□ -0.59
SCG2-201ENST00000305409 TMEM25Q86YD3 366 aa11.36□□□□□ -0.59
SCG2-201ENST00000305409 KDM1BQ8NB78 822 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms