RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 C19orf81C9J6K1 198 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 RHOBTB1O94844 696 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 CYP3A5P20815 502 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 LRP8Q14114 963 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 HMBOX1Q6NT76 420 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 SAMD7Q7Z3H4 446 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 P3H2Q8IVL5 708 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 CEP97Q8IW35 865 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 CENPLQ8N0S6 344 aaPredicted RBP13.03□□□□□ -0.32
TRIM35-201ENST00000305364 EID3Q8N140 333 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 ABHD11Q8NFV4 315 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 CHPT1Q8WUD6 406 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 SLC45A3Q96JT2 553 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 CNGB3Q9NQW8 809 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 NME4O00746 187 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 NDUFB5O43674 189 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 IDH3BO43837 385 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 NDUFS2O75306 463 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 AKAP5P24588 427 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 RPS12P25398 132 aaKnown RBP13.03□□□□□ -0.32
TRIM35-201ENST00000305364 GSSP48637 474 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 TTLL4Q14679 1199 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 FSCN1Q16658 493 aaKnown RBP13.03□□□□□ -0.32
TRIM35-201ENST00000305364 NDUFA5Q16718 116 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 FAM45BPQ6NSW5 357 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 FBXO16Q8IX29 292 aaPredicted RBP13.03□□□□□ -0.32
TRIM35-201ENST00000305364 SLC15A3Q8IY34 581 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 FAM45AQ8TCE6 357 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 BLOC1S5Q8TDH9 187 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 ELMO1Q92556 727 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 ZHX1-C8orf76Q96EF9 292 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 FEM1CQ96JP0 617 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 TMEM74Q96NL1 305 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 TRMOQ9BU70 441 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 INIPQ9NRY2 104 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 INTS10Q9NVR2 710 aaKnown RBP13.03□□□□□ -0.32
TRIM35-201ENST00000305364 CD274Q9NZQ7 290 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 GIT1Q9Y2X7 761 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 VWA7Q9Y334 891 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 FAM32AQ9Y421 112 aaKnown RBP13.03□□□□□ -0.32
TRIM35-201ENST00000305364 SNX10Q9Y5X0 201 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 CCL22O00626 93 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 XYLBO75191 536 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 TAF6P49848 677 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 ATP6V0D1P61421 351 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 TRAF3Q13114 568 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 ARHGEF6Q15052 776 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 FBXO39Q8N4B4 442 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 LZTR1Q8N653 840 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 REPS2Q8NFH8 660 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 MCFD2Q8NI22 146 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 COPS5Q92905 334 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 ZUFSPQ96AP4 578 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 UGT2B28Q9BY64 529 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 YTHDF1Q9BYJ9 559 aaKnown RBP13.03□□□□□ -0.32
TRIM35-201ENST00000305364 CEP44Q9C0F1 390 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 PRDM16Q9HAZ2 1276 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 SP110Q9HB58 689 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 EXD2Q9NVH0 621 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 C3orf18Q9UK00 162 aa13.03□□□□□ -0.32
TRIM35-201ENST00000305364 ABT1Q9ULW3 272 aaKnown RBP13.03□□□□□ -0.32
TRIM35-201ENST00000305364 ABCB7O75027 752 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 ADAM23O75077 832 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 RASAL1O95294 804 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 PITX1P78337 314 aaPredicted RBP13.02□□□□□ -0.32
TRIM35-201ENST00000305364 TRIM60Q495X7 471 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 RBM20Q5T481 1227 aaKnown RBP13.02□□□□□ -0.32
TRIM35-201ENST00000305364 ANKS6Q68DC2 871 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 CASS4Q9NQ75 786 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 LAMB2P55268 1798 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 TNPO2O14787 897 aaKnown RBP13.02□□□□□ -0.32
TRIM35-201ENST00000305364 FAM20BO75063 409 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 DBTP11182 482 aaKnown RBP13.02□□□□□ -0.32
TRIM35-201ENST00000305364 MATN1P21941 496 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 OXTRP30559 389 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 CCR1P32246 355 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 NDUFV1P49821 464 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 CACNB2Q08289 660 aaPredicted RBP13.02□□□□□ -0.32
TRIM35-201ENST00000305364 MEP1AQ16819 746 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 TREML2Q5T2D2 321 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 TRAF7Q6Q0C0 670 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 UNC93AQ86WB7 457 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 PRKD2Q9BZL6 878 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 LHPPQ9H008 270 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 FZD8Q9H461 694 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 SLC2A6Q9UGQ3 507 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 UBQLN1Q9UMX0 589 aaKnown RBP13.02□□□□□ -0.32
TRIM35-201ENST00000305364 SLC27A5Q9Y2P5 690 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 CAB39Q9Y376 341 aaPredicted RBP13.02□□□□□ -0.32
TRIM35-201ENST00000305364 TPRKBQ9Y3C4 175 aa13.02□□□□□ -0.32
TRIM35-201ENST00000305364 A8MU76 341 aa13.02□□□□□ -0.33
TRIM35-201ENST00000305364 PDZK1P1A8MUH7 402 aa13.02□□□□□ -0.33
TRIM35-201ENST00000305364 SIX3O95343 332 aaPredicted RBP13.02□□□□□ -0.33
TRIM35-201ENST00000305364 PGK1P00558 417 aa13.02□□□□□ -0.33
TRIM35-201ENST00000305364 EIF2S1P05198 315 aaKnown RBP13.02□□□□□ -0.33
TRIM35-201ENST00000305364 USP17L7P0C7H9 530 aa13.02□□□□□ -0.33
TRIM35-201ENST00000305364 CYP4B1P13584 511 aa13.02□□□□□ -0.33
TRIM35-201ENST00000305364 DCKP27707 260 aa13.02□□□□□ -0.33
TRIM35-201ENST00000305364 CLCN5P51795 746 aa13.02□□□□□ -0.33
TRIM35-201ENST00000305364 SNX19Q92543 992 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms