RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CLDN25C9JDP6 229 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 NR2F1P10589 423 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 EPORP19235 508 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 PBX1P40424 430 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 HNF4AP41235 474 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 ZIK1Q3SY52 487 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 CES3Q6UWW8 571 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 CHST15Q7LFX5 561 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 RERGQ96A58 199 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 FBXO6Q9NRD1 293 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 PXDNQ92626 1479 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 IPO13O94829 963 aaKnown RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 PCDH8O95206 1070 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 EPHA3P29320 983 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 MED22Q15528 200 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 XKR6Q5GH73 641 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 TMEM192Q8IY95 271 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 OR4L1Q8NH43 312 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 TIFAQ96CG3 184 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 GSDMCQ9BYG8 508 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 TRIM2Q9C040 744 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 UNC93B1Q9H1C4 597 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 TAS2R14Q9NYV8 317 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 FAM50BQ9Y247 325 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 PCDHGA10Q9Y5H3 936 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 ZNF879B4DU55 563 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 AP3D1O14617 1153 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 FADS2O95864 444 aaKnown RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 PGRP06401 933 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SULT2A1Q06520 285 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 MFSD10Q14728 455 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 TAF8Q7Z7C8 310 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 ADGRA1Q86SQ6 560 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 C15orf40Q8WUR7 153 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 SOCS4Q8WXH5 440 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 ELMO1Q92556 727 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 OXCT2Q9BYC2 517 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-201ENST00000302516 IL1RAPQ9NPH3 570 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 ADGRE2Q9UHX3 823 aa7.64□□□□□ -1.19
SF3B3-201ENST00000302516 CHURC1-FNTBB4DL54 471 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 CASKO14936 926 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 GCATO75600 419 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 CYP7B1O75881 506 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 CHRNA5P30532 468 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 MBTD1Q05BQ5 628 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 PURBQ96QR8 312 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 BCL2L14Q9BZR8 327 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 POLR3HQ9Y535 204 aaPredicted RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 CASTOR2A6NHX0 329 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 H3BNH8 94 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 UPP2O95045 317 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 NUDT14O95848 222 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 LYNP07948 512 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 PDCD4Q53EL6 469 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 SLC26A9Q7LBE3 791 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 SLITRK4Q8IW52 837 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TLCD1Q96CP7 247 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 FAXDC2Q96IV6 333 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 SNRNP25Q9BV90 132 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 UNKQ9C0B0 810 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 SP140LQ9H930 580 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 OGDHLQ9ULD0 1010 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 PSMD11O00231 422 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 SLC25A12O75746 678 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ASGR1P07306 291 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 PTPN1P18031 435 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TNNI3P19429 210 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 CHKAP35790 457 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 MAPK10P53779 464 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 RPL19P84098 196 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 THOC7Q6I9Y2 204 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TMEM126BQ8IUX1 230 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 CLP1Q92989 425 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TUBGCP5Q96RT8 1024 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 GBA3Q9H227 469 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 LRRC4CQ9HCJ2 640 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 WDR37Q9Y2I8 494 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TRPV2Q9Y5S1 764 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 RICTORQ6R327 1708 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 CDH5P33151 784 aaPredicted RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 CCR4P51679 360 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TEAD4Q15561 434 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 FBXO43Q4G163 708 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 GCNT6Q5T4J0 391 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 OLFML2AQ68BL7 652 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 GPALPP1Q8IXQ4 340 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TTLL2Q9BWV7 592 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ZNF780BQ9Y6R6 833 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 NRCAMQ92823 1304 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 LAMB4A4D0S4 1761 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 FADS2P1A8MWK0 482 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 NPHS1O60500 1241 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 ALDH2P05091 517 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 UROSP10746 265 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TUBA3CQ13748 450 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 GPAT3Q53EU6 434 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 RBM48Q5RL73 367 aaKnown RBP7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TMC8Q8IU68 726 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 TMIEQ8NEW7 156 aa7.63□□□□□ -1.19
SF3B3-201ENST00000302516 PHF12Q96QT6 1004 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms