RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 SLC25A51Q9H1U9 297 aa11.25□□□□□ -0.61
CLCC1-201ENST00000302500 USP29Q9HBJ7 922 aa11.25□□□□□ -0.61
CLCC1-201ENST00000302500 MRPL40Q9NQ50 206 aaKnown RBP11.25□□□□□ -0.61
CLCC1-201ENST00000302500 NFKBIL1Q9UBC1 381 aaPredicted RBP11.25□□□□□ -0.61
CLCC1-201ENST00000302500 APOBEC3BQ9UH17 382 aaKnown RBP11.25□□□□□ -0.61
CLCC1-201ENST00000302500 RABGEF1Q9UJ41 708 aa11.25□□□□□ -0.61
CLCC1-201ENST00000302500 CHKBQ9Y259 395 aa11.25□□□□□ -0.61
CLCC1-201ENST00000302500 EFR3BQ9Y2G0 817 aa11.25□□□□□ -0.61
CLCC1-201ENST00000302500 HEY1Q9Y5J3 304 aa11.25□□□□□ -0.61
CLCC1-201ENST00000302500 UNC13CQ8NB66 2214 aa11.25□□□□□ -0.61
CLCC1-201ENST00000302500 LOC285095A0A1B0GVY8 99 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 FFAR2O15552 330 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 NOBOXO60393 691 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 CDK4P11802 303 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 MYCLP1P12525 358 aaPredicted RBP11.24□□□□□ -0.61
CLCC1-201ENST00000302500 ZFXP17010 805 aaPredicted RBP11.24□□□□□ -0.61
CLCC1-201ENST00000302500 ZNF30P17039 623 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 CD86P42081 329 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 SRP54P61011 504 aaKnown RBP11.24□□□□□ -0.61
CLCC1-201ENST00000302500 CDK3Q00526 305 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 C1orf61Q13536 156 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 GSE1Q14687 1217 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 RTP5Q14D33 572 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 PDK1Q15118 436 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 NOMO1Q15155 1222 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 DEFB133Q30KQ1 61 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 PRRT3Q5FWE3 981 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 PERM1Q5SV97 790 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 GUSBP11Q6P575 273 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 ADAMTSL4Q6UY14 1074 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 HEATR4Q86WZ0 1026 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 BBS5Q8N3I7 341 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 SPATA22Q8NHS9 363 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 CCL4L1Q8NHW4 92 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 BTN2A2Q8WVV5 523 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 SCAMP4Q969E2 229 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 NUS1Q96E22 293 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 OXNAD1Q96HP4 312 aaPredicted RBP11.24□□□□□ -0.61
CLCC1-201ENST00000302500 WDR92Q96MX6 357 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 BAG1Q99933 345 aaPredicted RBP11.24□□□□□ -0.61
CLCC1-201ENST00000302500 DUSP23Q9BVJ7 150 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 PCDH9Q9HC56 1237 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 TMPRSS11EQ9UL52 423 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 ZMIZ1Q9ULJ6 1067 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 ADGRG1Q9Y653 693 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 CAPN6Q9Y6Q1 641 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 URB1O60287 2271 aaKnown RBP11.24□□□□□ -0.61
CLCC1-201ENST00000302500 ADAMTS20P59510 1910 aa11.24□□□□□ -0.61
CLCC1-201ENST00000302500 FADS2P1A8MWK0 482 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 APOC4-APOC2K7ER74 178 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 NTN3O00634 580 aaPredicted RBP11.23□□□□□ -0.61
CLCC1-201ENST00000302500 SPOPO43791 374 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 KRT37O76014 449 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 ZRANB2O95218 330 aaKnown RBP eCLIP11.23□□□□□ -0.61
CLCC1-201ENST00000302500 CLDN7O95471 211 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 MT-CYBP00156 380 aaPredicted RBP11.23□□□□□ -0.61
CLCC1-201ENST00000302500 APOC2P02655 101 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 PYGMP11217 842 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 THOP1P52888 689 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 COPS2P61201 443 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 DYNLT1P63172 113 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 PPARDQ03181 441 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 LLGL1Q15334 1064 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 ST3GAL2Q16842 350 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 HES3Q5TGS1 186 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 LVRNQ6Q4G3 990 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 USP45Q70EL2 814 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 RCOR2Q8IZ40 523 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 ZNF567Q8N184 647 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 GALNT15Q8N3T1 639 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 SDR16C5Q8N3Y7 309 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 OR56A4Q8NGH8 313 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 GPBAR1Q8TDU6 330 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 LMX1AQ8TE12 382 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 PDCD6IPQ8WUM4 868 aaKnown RBP11.23□□□□□ -0.61
CLCC1-201ENST00000302500 PRR11Q96HE9 360 aaPredicted RBP11.23□□□□□ -0.61
CLCC1-201ENST00000302500 CALR3Q96L12 384 aaKnown RBP11.23□□□□□ -0.61
CLCC1-201ENST00000302500 DESI2Q9BSY9 194 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 GLOD4Q9HC38 313 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 SPASTQ9UBP0 616 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 SPO11Q9Y5K1 396 aa11.23□□□□□ -0.61
CLCC1-201ENST00000302500 PRSS38A1L453 326 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 TRABD2BA6NFA1 517 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 NEMP2A6NFY4 417 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 GOLGA8CPA6NN73 597 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 SRRM3A6NNA2 597 aaPredicted RBP11.22□□□□□ -0.61
CLCC1-201ENST00000302500 H3BM21 787 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 GAPDHSO14556 408 aaPredicted RBP11.22□□□□□ -0.61
CLCC1-201ENST00000302500 AURKAO14965 403 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 PPP1R12AO14974 1030 aaPredicted RBP11.22□□□□□ -0.61
CLCC1-201ENST00000302500 OPA1O60313 960 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 DNAJC6O75061 913 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 RASGRP1O95267 797 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 CYP2A6P11509 494 aaPredicted RBP11.22□□□□□ -0.61
CLCC1-201ENST00000302500 XPAP23025 273 aaPredicted RBP11.22□□□□□ -0.61
CLCC1-201ENST00000302500 CA5AP35218 305 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 SPINT3P49223 89 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 XRCC4Q13426 336 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 TFDP2Q14188 446 aa11.22□□□□□ -0.61
CLCC1-201ENST00000302500 NR1D2Q14995 579 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms