RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 PDCD2LQ9BRP1 358 aa12.36□□□□□ -0.43
ABCA3-201ENST00000301732 DMTF1Q9Y222 760 aa12.36□□□□□ -0.43
ABCA3-201ENST00000301732 MANFP55145 182 aaKnown RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 KHDC1Q4VXA5 237 aaKnown RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 SLC9A4Q6AI14 798 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 NXNL1Q96CM4 212 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 S100A14Q9HCY8 104 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 ITM2CQ9NQX7 267 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 GRHL1Q9NZI5 618 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 ITGA11Q9UKX5 1188 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 INO80Q9ULG1 1556 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 TTC24A2A3L6 582 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 WNT7AO00755 349 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 SLC25A27O95847 323 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 ZNF806P0C7X5 589 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 DGKAP23743 735 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 TTKP33981 857 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 GJA8P48165 433 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 SNRPFP62306 86 aaKnown RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 MPP1Q00013 466 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 PLCZ1Q86YW0 608 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 ARMC10Q8N2F6 343 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 CBR4Q8N4T8 237 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 BRD9Q9H8M2 597 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 LIN28AQ9H9Z2 209 aaKnown RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 COMMD3Q9UBI1 195 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 SNX6Q9UNH7 406 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 PEX10O60683 326 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 SLC6A2P23975 617 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 CDH15P55291 814 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 GNA12Q03113 381 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 PRKG2Q13237 762 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 SP140Q13342 867 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 ZNF268Q14587 947 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 SNAPC1Q16533 368 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 CYP2A13Q16696 494 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 TIMM50Q3ZCQ8 353 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 PAOXQ6QHF9 649 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 CCDC80Q76M96 950 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 ECHDC2Q86YB7 292 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 FITM2Q8N6M3 262 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 SMG7Q92540 1137 aaKnown RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 CORO1BQ9BR76 489 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 ZNF490Q9ULM2 529 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 VPS4AQ9UN37 437 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 RPTORQ8N122 1335 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 A0A0A0MRY4 1105 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 TFPIP10646 304 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 MC4RP32245 332 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 BACE1P56817 501 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 ODF4Q2M2E3 257 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 MPPE1Q53F39 396 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 PCID2Q5JVF3 399 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 TTC23Q5W5X9 447 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 GLYATQ6IB77 296 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 ZNF563Q8TA94 476 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 LPGAT1Q92604 370 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 SENP8Q96LD8 212 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 SPATA13Q96N96 652 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 FGFBP2Q9BYJ0 223 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 TTTY10Q9BZA0 68 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 CORO1CQ9ULV4 474 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 NCAM2O15394 837 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 ECDO95905 644 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 OR4Q2P0C623 313 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 NPR3P17342 541 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 POLR2EP19388 210 aaKnown RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 GANABQ14697 944 aaKnown RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 USF2Q15853 346 aaPredicted RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 OCLNQ16625 522 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 FIGNQ5HY92 759 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 PLET1Q6UQ28 207 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 TMPRSS11BQ86T26 416 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 ZNF280BQ86YH2 543 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 PQLC1Q8N2U9 271 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 MREGQ8N565 214 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 KBTBD8Q8NFY9 601 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 DHRS1Q96LJ7 313 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 BRINP2Q9C0B6 783 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 SNTG1Q9NSN8 517 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 IMP3Q9NV31 184 aaKnown RBP12.35□□□□□ -0.43
ABCA3-201ENST00000301732 CDH22Q9UJ99 828 aa12.35□□□□□ -0.43
ABCA3-201ENST00000301732 YDJCA8MPS7 323 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 H3BMM5 538 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 SERPINA6P08185 405 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 ZNF24P17028 368 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 ZNF484Q5JVG2 852 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 GPR158Q5T848 1215 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 FRRS1Q6ZNA5 592 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 LRRC4CQ9HCJ2 640 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 BRD7Q9NPI1 651 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 PFDN2Q9UHV9 154 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 MED14O60244 1454 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 DNM1LO00429 736 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 MGRN1O60291 552 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 MYCLP1P12525 358 aaPredicted RBP12.34□□□□□ -0.43
ABCA3-201ENST00000301732 IGFBP4P22692 258 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 PTPN3P26045 913 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 BTN3A2P78410 334 aa12.34□□□□□ -0.43
ABCA3-201ENST00000301732 FAM91A1Q658Y4 838 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms