RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ASB9Q96DX5 294 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 FAR2Q96K12 515 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 EXOC2Q96KP1 924 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 BTN2A3PQ96KV6 586 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 ZIC5Q96T25 663 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 SEPT5Q99719 369 aaPredicted RBP12.9□□□□□ -0.34
HIF3A-204ENST00000300862 GRIP2Q9C0E4 1043 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 UNC93B1Q9H1C4 597 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 FBXO44Q9H4M3 255 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 CCSER2Q9H7U1 834 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 ZFYVE28Q9HCC9 887 aa12.9□□□□□ -0.34
HIF3A-204ENST00000300862 CHCHD3Q9NX63 227 aaKnown RBP12.9□□□□□ -0.34
HIF3A-204ENST00000300862 A0A1B0GTW7 788 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 LOC285095A0A1B0GVY8 99 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 CD3EAPO15446 510 aaKnown RBP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 PAPSS2O95340 614 aaPredicted RBP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 WISP3O95389 354 aaPredicted RBP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 GLP2RO95838 553 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 CLPTM1O96005 669 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 ELNP15502 786 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 KCNQ1P51787 676 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 SERINC3Q13530 473 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 KIF19Q2TAC6 998 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 MGAT5BQ3V5L5 792 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 LARP4Q71RC2 724 aaKnown RBP eCLIP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 SLC22A9Q8IVM8 553 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 FUNDC1Q8IVP5 155 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 COLGALT2Q8IYK4 626 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 TEX26Q8N6G2 289 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 STON2Q8WXE9 905 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 LINC01599Q8WXQ3 324 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 EME1Q96AY2 570 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 TRIM8Q9BZR9 551 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 UPF3AQ9H1J1 476 aaKnown RBP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 AKTIPQ9H8T0 292 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 MID1IP1Q9NPA3 183 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 UTP6Q9NYH9 597 aaKnown RBP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 BCAP29Q9UHQ4 241 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 FAM50BQ9Y247 325 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 FNDC3AQ9Y2H6 1198 aaKnown RBP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 PCDHB5Q9Y5E4 795 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 DNAJC15Q9Y5T4 150 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 PATJQ8NI35 1801 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 UBA6A0AVT1 1052 aaPredicted RBP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 NRP2O60462 931 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 CDK14O94921 469 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 CD1DP15813 335 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 NELFEP18615 380 aaKnown RBP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 PBX3P40426 434 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 SLC7A2P52569 658 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 YBX1P67809 324 aaKnown RBP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 MYBPC1Q00872 1141 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 ECT2LQ008S8 904 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 GRB7Q14451 532 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 ZNF235Q14590 738 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 MBTPS1Q14703 1052 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 FAM171A1Q5VUB5 890 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 NADSYN1Q6IA69 706 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 TRIM74Q86UV6 250 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 TRIM73Q86UV7 250 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 RETREG3Q86VR2 466 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 ADCY4Q8NFM4 1077 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 GABPB2Q8TAK5 448 aaPredicted RBP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 GIPC2Q8TF65 315 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 DLG3Q92796 817 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 DDX18Q9NVP1 670 aaKnown RBP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.89□□□□□ -0.35
HIF3A-204ENST00000300862 EPS15L1Q9UBC2 864 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 LZTS1Q9Y250 596 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 BTRCQ9Y297 605 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 AP4S1Q9Y587 144 aa12.89□□□□□ -0.35
HIF3A-204ENST00000300862 IGLV3-10A0A075B6K4 115 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 A0A0U1RQS6 177 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 ARHGEF37A1IGU5 675 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 NR5A2O00482 541 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 TRIM24O15164 1050 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 HERVK_113P63132 956 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 CAP1Q01518 475 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 PRKCZQ05513 592 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 DSC1Q08554 894 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 NFE2Q16621 373 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-204ENST00000300862 TRIM71Q2Q1W2 868 aaKnown RBP12.88□□□□□ -0.35
HIF3A-204ENST00000300862 MYLK3Q32MK0 819 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 UGT3A2Q3SY77 523 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 DDIASQ8IXT1 998 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 OR7D4Q8NG98 312 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 ZFP28Q8NHY6 868 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 TRPC4APQ8TEL6 797 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 SLCO4A1Q96BD0 722 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 C8orf48Q96LL4 319 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 NSMCE3Q96MG7 304 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 CYP2S1Q96SQ9 504 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 PRPF18Q99633 342 aaKnown RBP12.88□□□□□ -0.35
HIF3A-204ENST00000300862 ERVK-6Q9BXR3 956 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 GPR62Q9BZJ7 368 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 COQ10BQ9H8M1 238 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 SPAG4Q9NPE6 437 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 SNX13Q9Y5W8 968 aa12.88□□□□□ -0.35
HIF3A-204ENST00000300862 PIP5K1BO14986 540 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms