RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 DNAJC28Q9NX36 388 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 FAM169AQ9Y6X4 670 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 PCNX2A6NKB5 2137 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 A0A0J9YYE9 177 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 NPIPB15A6NHN6 443 aaPredicted RBP12.1□□□□□ -0.47
HMGB2-201ENST00000296503 HEXIM1O94992 359 aaKnown RBP12.1□□□□□ -0.47
HMGB2-201ENST00000296503 PRLP01236 227 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 TRBC1P01850 177 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 PCCBP05166 539 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 RBP3P10745 1247 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 RBL1P28749 1068 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 TNFRSF8P28908 595 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 HNRNPH1P31943 449 aaKnown RBP12.1□□□□□ -0.47
HMGB2-201ENST00000296503 PFN3P60673 137 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 YPEL5P62699 121 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 INPP5AQ14642 412 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 AGERQ15109 404 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 RPS6KA1Q15418 735 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 SHBQ15464 509 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 TRIP6Q15654 476 aaKnown RBP12.1□□□□□ -0.47
HMGB2-201ENST00000296503 CNGA3Q16281 694 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 ALS2CLQ60I27 953 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 CCDC70Q6NSX1 233 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 TSPAN33Q86UF1 283 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 MMGT1Q8N4V1 131 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 SPATA22Q8NHS9 363 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 IFT43Q96FT9 208 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 QKIQ96PU8 341 aaKnown RBP eCLIP12.1□□□□□ -0.47
HMGB2-201ENST00000296503 SMIM14Q96QK8 99 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 VAT1Q99536 393 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 MLPHQ9BV36 600 aaPredicted RBP12.1□□□□□ -0.47
HMGB2-201ENST00000296503 UBP1Q9NZI7 540 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 SAR1BQ9Y6B6 198 aa12.1□□□□□ -0.47
HMGB2-201ENST00000296503 A0A0U1RQS6 177 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 SPTY2D1-AS1A0A0U1RR47 76 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 ANKRD66B4E2M5 251 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 AGPSO00116 658 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 SDC3O75056 442 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 PMPCBO75439 489 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 MT-CYBP00156 380 aaPredicted RBP12.09□□□□□ -0.47
HMGB2-201ENST00000296503 NFKB1P19838 968 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 EPHA8P29322 1005 aaPredicted RBP12.09□□□□□ -0.47
HMGB2-201ENST00000296503 GRK6P43250 576 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 RPL26P61254 145 aaKnown RBP12.09□□□□□ -0.47
HMGB2-201ENST00000296503 SIM1P81133 766 aaPredicted RBP12.09□□□□□ -0.47
HMGB2-201ENST00000296503 FZD2Q14332 565 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 INAVAQ3KP66 663 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 N4BP2L1Q5TBK1 243 aaPredicted RBP12.09□□□□□ -0.47
HMGB2-201ENST00000296503 SEL1L2Q5TEA6 688 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 MEI1Q5TIA1 1274 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 CRTC1Q6UUV9 634 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 CDKL3Q8IVW4 592 aaPredicted RBP12.09□□□□□ -0.47
HMGB2-201ENST00000296503 ZNF567Q8N184 647 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 SAP25Q8TEE9 199 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 MCCC1Q96RQ3 725 aaPredicted RBP12.09□□□□□ -0.47
HMGB2-201ENST00000296503 APOOQ9BUR5 198 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 KCTD5Q9NXV2 234 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 TRHDEQ9UKU6 1024 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 PCOLCE2Q9UKZ9 415 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 RPL26L1Q9UNX3 145 aaKnown RBP12.09□□□□□ -0.47
HMGB2-201ENST00000296503 BTBD3Q9Y2F9 522 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 TDRD6O60522 2096 aaKnown RBP12.09□□□□□ -0.47
HMGB2-201ENST00000296503 SPTBN2O15020 2390 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 LRRK1Q38SD2 2015 aa12.09□□□□□ -0.47
HMGB2-201ENST00000296503 SPAARA0A1B0GVQ0 90 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 GOLGA6CA6NDK9 693 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 F5H423 210 aaPredicted RBP12.08□□□□□ -0.48
HMGB2-201ENST00000296503 TOR1BO14657 336 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 KCNN4O15554 427 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 STK10O94804 968 aaKnown RBP12.08□□□□□ -0.48
HMGB2-201ENST00000296503 GOLGA6DP0CG33 693 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 LHCGRP22888 699 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 CD68P34810 354 aaPredicted RBP12.08□□□□□ -0.48
HMGB2-201ENST00000296503 ETV3P41162 512 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 CDK18Q07002 472 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 GALNT3Q14435 633 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 QPCTQ16769 361 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 LRRC66Q68CR7 880 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 HSD11B1LQ7Z5J1 315 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 EID2Q8N6I1 236 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 PLA2G15Q8NCC3 412 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 TRIM58Q8NG06 486 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 AENQ8WTP8 325 aaKnown RBP12.08□□□□□ -0.48
HMGB2-201ENST00000296503 NUS1Q96E22 293 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 COQ10AQ96MF6 247 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 CAPS2Q9BXY5 557 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 GOLGA6AQ9NYA3 693 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 FAM153AQ9UHL3 310 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 DNPEPQ9ULA0 475 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 OR1A2Q9Y585 309 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 TP53BP1Q12888 1972 aaPredicted RBP12.08□□□□□ -0.48
HMGB2-201ENST00000296503 GOLGA6BA6NDN3 693 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 PSMD11O00231 422 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 CLDN7O95471 211 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 ZNF30P17039 623 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 GM2AP17900 193 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 HTR1BP28222 390 aa12.08□□□□□ -0.48
HMGB2-201ENST00000296503 HNRNPKP61978 463 aaKnown RBP eCLIP12.08□□□□□ -0.48
HMGB2-201ENST00000296503 PTSQ03393 145 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms