RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 GANCQ8TET4 914 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 RAB7BQ96AH8 199 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 TTC25Q96NG3 672 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 HHIPQ96QV1 700 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 ZFYVE1Q9HBF4 777 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 SLC2A6Q9UGQ3 507 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 GGT7Q9UJ14 662 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 RPS6KL1Q9Y6S9 549 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 USP1O94782 785 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 PAPSS2O95340 614 aaPredicted RBP17.78■□□□□ 0.44
CCDC78-201ENST00000293889 ACSL3O95573 720 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 POLBP06746 335 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 NUDT17P0C025 328 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 LPOP22079 712 aaPredicted RBP17.78■□□□□ 0.44
CCDC78-201ENST00000293889 ZNF140P52738 457 aaPredicted RBP17.78■□□□□ 0.44
CCDC78-201ENST00000293889 TAS2R38P59533 333 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 PTSQ03393 145 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 RALGDSQ12967 914 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 CRYMQ14894 314 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 TTC31Q49AM3 519 aaPredicted RBP17.78■□□□□ 0.44
CCDC78-201ENST00000293889 KCTD16Q68DU8 428 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 ANO7Q6IWH7 933 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 ESRP1Q6NXG1 681 aaKnown RBP17.78■□□□□ 0.44
CCDC78-201ENST00000293889 FAM131CQ96AQ9 280 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 ZNF669Q96BR6 464 aaPredicted RBP17.78■□□□□ 0.44
CCDC78-201ENST00000293889 EPB41L4BQ9H329 900 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 TREX1Q9NSU2 369 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 FADS3Q9Y5Q0 445 aa17.78■□□□□ 0.44
CCDC78-201ENST00000293889 EML5Q05BV3 1969 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 ZCWPW2A0A1B0GU75 182 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 RIPK2O43353 540 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 ACADMP11310 421 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 HMGCLP35914 325 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 CXCL12P48061 93 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 CCDC15Q0P6D6 951 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 ELP6Q0PNE2 266 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 CNGA3Q16281 694 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 C3orf62Q6ZUJ4 267 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 PGBD3Q8N328 593 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 OR4K2Q8NGD2 314 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 OR13C4Q8NGS5 318 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 OR13J1Q8NGT2 312 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 STYXQ8WUJ0 223 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 UBLCP1Q8WVY7 318 aaPredicted RBP17.77■□□□□ 0.44
CCDC78-201ENST00000293889 DNAJC1Q96KC8 554 aaKnown RBP17.77■□□□□ 0.44
CCDC78-201ENST00000293889 VPS37BQ9H9H4 285 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 CD93Q9NPY3 652 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 PRMT8Q9NR22 394 aaPredicted RBP17.77■□□□□ 0.44
CCDC78-201ENST00000293889 IL17CQ9P0M4 197 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 BCCIPQ9P287 314 aaKnown RBP eCLIP17.77■□□□□ 0.44
CCDC78-201ENST00000293889 FAM169AQ9Y6X4 670 aa17.77■□□□□ 0.44
CCDC78-201ENST00000293889 GALR2O43603 387 aaPredicted RBP17.76■□□□□ 0.43
CCDC78-201ENST00000293889 ALDH1A2O94788 518 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 CCR3P51677 355 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 TMPRSS15P98073 1019 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 PDE1BQ01064 536 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 ARHGEF7Q14155 803 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 SKIDA1Q1XH10 827 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 SPANXN3Q5MJ09 141 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 TSSK4Q6SA08 328 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 USP30Q70CQ3 517 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 TLCD1Q96CP7 247 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 WRAP53Q9BUR4 548 aaKnown RBP17.76■□□□□ 0.43
CCDC78-201ENST00000293889 BPIFA1Q9NP55 256 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 NLE1Q9NVX2 485 aaPredicted RBP17.76■□□□□ 0.43
CCDC78-201ENST00000293889 EBF1Q9UH73 591 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 RIMKLBQ9ULI2 386 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 K7ESF4 209 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 CCL22O00626 93 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 NEMP1O14524 444 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 NDUFAB1O14561 156 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 STX7O15400 261 aaKnown RBP17.76■□□□□ 0.43
CCDC78-201ENST00000293889 LAMTOR5O43504 91 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 AP1G1O43747 822 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 GSTA2P09210 222 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 C1SP09871 688 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 TSHRP16473 764 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 ZNF30P17039 623 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 PSMA3P25788 255 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 LIG3P49916 1009 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 TPMTP51580 245 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 ARSDP51689 593 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 STC1P52823 247 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 ACVR1Q04771 509 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 SFSWAPQ12872 951 aaKnown RBP17.76■□□□□ 0.43
CCDC78-201ENST00000293889 SLC29A2Q14542 456 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 TMEM52BQ4KMG9 183 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 LIPIQ6XZB0 460 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 CROCCP2Q86T23 111 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 UNC5BQ8IZJ1 945 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.76■□□□□ 0.43
CCDC78-201ENST00000293889 UHMK1Q8TAS1 419 aaKnown RBP17.76■□□□□ 0.43
CCDC78-201ENST00000293889 GSDMBQ8TAX9 411 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 PEX13Q92968 403 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 TMEM109Q9BVC6 243 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 ITM2CQ9NQX7 267 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 FZD4Q9ULV1 537 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 NCKAP1Q9Y2A7 1128 aa17.76■□□□□ 0.43
CCDC78-201ENST00000293889 GOLGA8CPA6NN73 597 aa17.75■□□□□ 0.43
CCDC78-201ENST00000293889 SLC7A4O43246 635 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms