RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 EPHB3P54753 998 aa19.06■□□□□ 0.64
SHF-201ENST00000290894 CDH18Q13634 790 aa19.06■□□□□ 0.64
SHF-201ENST00000290894 RAB33AQ14088 237 aa19.06■□□□□ 0.64
SHF-201ENST00000290894 OR4D1Q15615 310 aa19.06■□□□□ 0.64
SHF-201ENST00000290894 CHST9Q7L1S5 443 aa19.06■□□□□ 0.64
SHF-201ENST00000290894 TMA16Q96EY4 203 aaKnown RBP19.06■□□□□ 0.64
SHF-201ENST00000290894 TRMT2BQ96GJ1 504 aaKnown RBP19.06■□□□□ 0.64
SHF-201ENST00000290894 MYCBPQ99417 103 aaPredicted RBP19.06■□□□□ 0.64
SHF-201ENST00000290894 SMG9Q9H0W8 520 aaKnown RBP19.06■□□□□ 0.64
SHF-201ENST00000290894 NLE1Q9NVX2 485 aaPredicted RBP19.06■□□□□ 0.64
SHF-201ENST00000290894 POLR3BQ9NW08 1133 aaPredicted RBP19.06■□□□□ 0.64
SHF-201ENST00000290894 SPG21Q9NZD8 308 aa19.06■□□□□ 0.64
SHF-201ENST00000290894 PCDHB9Q9Y5E1 797 aa19.06■□□□□ 0.64
SHF-201ENST00000290894 ANKRD66B4E2M5 251 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 CD1DP15813 335 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 CTPS1P17812 591 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 SP100P23497 879 aaPredicted RBP19.05■□□□□ 0.64
SHF-201ENST00000290894 GKP32189 559 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 BTKQ06187 659 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 PAQR3Q6TCH7 311 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 TPGS1Q6ZTW0 290 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 NET1Q7Z628 596 aaPredicted RBP19.05■□□□□ 0.64
SHF-201ENST00000290894 HS6ST3Q8IZP7 471 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 CNDP1Q96KN2 507 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 TOX2Q96NM4 488 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 TTC1Q99614 292 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 MRPL17Q9NRX2 175 aaKnown RBP19.05■□□□□ 0.64
SHF-201ENST00000290894 CDH22Q9UJ99 828 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 TSR3Q9UJK0 312 aaKnown RBP19.05■□□□□ 0.64
SHF-201ENST00000290894 CLEC4EQ9ULY5 219 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 SDHDO14521 159 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 RHOBTB1O94844 696 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 LMNAP02545 664 aaKnown RBP19.05■□□□□ 0.64
SHF-201ENST00000290894 CKMP06732 381 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 GABRR2P28476 465 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 MSX2P35548 267 aaPredicted RBP19.05■□□□□ 0.64
SHF-201ENST00000290894 DNAJB13P59910 316 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 ACTR3P61158 418 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 TBL3Q12788 808 aaKnown RBP19.05■□□□□ 0.64
SHF-201ENST00000290894 METTL21CQ5VZV1 264 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 APCDD1Q8J025 514 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 YME1L1Q96TA2 773 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 VTI1BQ9UEU0 232 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 VPS51Q9UID3 782 aa19.05■□□□□ 0.64
SHF-201ENST00000290894 CCDC189A1A4V9 331 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 C2orf81A6NN90 581 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 SRP72O76094 671 aaKnown RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 PARNO95453 639 aaKnown RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 ALPIP09923 528 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 PPARGP37231 505 aaPredicted RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 RHOAP61586 193 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 PFKFB4Q16877 469 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 C6orf163Q5TEZ5 329 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 GALNT7Q86SF2 657 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 HERC6Q8IVU3 1022 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.04■□□□□ 0.64
SHF-201ENST00000290894 GPR150Q8NGU9 434 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 PYDC1Q8WXC3 89 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 RSRC1Q96IZ7 334 aaKnown RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 CEP295NLQ96MC4 621 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 GSTO2Q9H4Y5 243 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 IL21Q9HBE4 155 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 NMRK1Q9NWW6 199 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 IKZF3Q9UKT9 509 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 ARHGAP26Q9UNA1 814 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 MED16Q9Y2X0 877 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 COPG1Q9Y678 874 aaKnown RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 SMAD6O43541 496 aaKnown RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 BAG2O95816 211 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 CLTBP09497 229 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 MC4RP32245 332 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 WDR5P61964 334 aaKnown RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 TAF1AQ15573 450 aaPredicted RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 TRMT5Q32P41 509 aaKnown RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 GAREM2Q75VX8 874 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 LMNTD2Q8IXW0 634 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 RNF148Q8N7C7 305 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 PTGR2Q8N8N7 351 aaPredicted RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 DDI1Q8WTU0 396 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 NSUN5Q96P11 429 aaKnown RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 SLC30A3Q99726 388 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 AARSD1Q9BTE6 412 aaKnown RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 RC3H2Q9HBD1 1191 aaKnown RBP19.04■□□□□ 0.64
SHF-201ENST00000290894 STOML1Q9UBI4 398 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 PPM1HQ9ULR3 514 aa19.04■□□□□ 0.64
SHF-201ENST00000290894 NCF1BA6NI72 391 aaPredicted RBP19.03■□□□□ 0.64
SHF-201ENST00000290894 GOLGA8CPA6NN73 597 aa19.03■□□□□ 0.64
SHF-201ENST00000290894 NCF1CA8MVU1 366 aaPredicted RBP19.03■□□□□ 0.64
SHF-201ENST00000290894 A8MX80 341 aa19.03■□□□□ 0.64
SHF-201ENST00000290894 GREM1O60565 184 aa19.03■□□□□ 0.64
SHF-201ENST00000290894 NDUFS3O75489 264 aa19.03■□□□□ 0.64
SHF-201ENST00000290894 NCF1P14598 390 aaPredicted RBP19.03■□□□□ 0.64
SHF-201ENST00000290894 SLC34A1Q06495 639 aa19.03■□□□□ 0.64
SHF-201ENST00000290894 PTPRNQ16849 979 aa19.03■□□□□ 0.64
SHF-201ENST00000290894 ZRANB3Q5FWF4 1079 aa19.03■□□□□ 0.64
SHF-201ENST00000290894 RCN3Q96D15 328 aa19.03■□□□□ 0.64
SHF-201ENST00000290894 GPR21Q99679 349 aa19.03■□□□□ 0.64
SHF-201ENST00000290894 HERC2P3Q9BVR0 1158 aa19.03■□□□□ 0.64
SHF-201ENST00000290894 PTGDR2Q9Y5Y4 395 aa19.03■□□□□ 0.64
SHF-201ENST00000290894 CNPP09543 421 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms