RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 IRF4Q15306 451 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 UAP1L1Q3KQV9 507 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 SLC45A4Q5BKX6 768 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 ARMC12Q5T9G4 340 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 KAZNQ674X7 775 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 ESRP1Q6NXG1 681 aaKnown RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 BZW1Q7L1Q6 419 aaKnown RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 PEX26Q7Z412 305 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 NAXDQ8IW45 347 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 SYCE1Q8N0S2 351 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 BBS5Q8N3I7 341 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 SPATA22Q8NHS9 363 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 NSMCE1Q8WV22 266 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 TFB1MQ8WVM0 346 aaKnown RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 HTR3CQ8WXA8 447 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 P3H4Q92791 437 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 SCARF2Q96GP6 870 aaPredicted RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 OXNAD1Q96HP4 312 aaPredicted RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 TBATAQ96M53 351 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 AGAP3Q96P47 875 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 FCRL5Q96RD9 977 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 VAT1Q99536 393 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 MYOCQ99972 504 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 APOOQ9BUR5 198 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 LGR4Q9BXB1 951 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 TEX101Q9BY14 249 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 PCDH9Q9HC56 1237 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 UCKL1Q9NWZ5 548 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 CNOT6Q9ULM6 557 aaKnown RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 DOLKQ9UPQ8 538 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 R3HDM2Q9Y2K5 976 aaKnown RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 PPP2R2CQ9Y2T4 447 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 PTPRBP23467 1997 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 GOLGA6L3A6NEY3 463 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 CAPN8A6NHC0 703 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 A8MX80 341 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 TRIM38O00635 465 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 FPGTO14772 594 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 FLRT2O43155 660 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 GCATO75600 419 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 PIAS2O75928 621 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 MT-CYBP00156 380 aaPredicted RBP9.16□□□□□ -0.94
HMGN1-201ENST00000288344 CPP00450 1065 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 C1SP09871 688 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 CD86P42081 329 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 RPIAP49247 311 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 CCT8P50990 548 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 ATXN3P54252 364 aaPredicted RBP9.16□□□□□ -0.94
HMGN1-201ENST00000288344 C21orf59P57076 290 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 FOXK2Q01167 660 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 ZNF211Q13398 564 aaPredicted RBP9.16□□□□□ -0.94
HMGN1-201ENST00000288344 MTM1Q13496 603 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 LRRC14Q15048 493 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 OASLQ15646 514 aaKnown RBP9.16□□□□□ -0.94
HMGN1-201ENST00000288344 TRIP6Q15654 476 aaKnown RBP9.16□□□□□ -0.94
HMGN1-201ENST00000288344 KCTD11Q693B1 232 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 PSAPL1Q6NUJ1 521 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 ERAP2Q6P179 960 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 PNCKQ6P2M8 343 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 RANBP10Q6VN20 620 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 Q6ZVL8 140 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 TMC3Q7Z5M5 1100 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 ZC3H18Q86VM9 953 aaKnown RBP9.16□□□□□ -0.94
HMGN1-201ENST00000288344 GATAD2AQ86YP4 633 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 ANKMY2Q8IV38 441 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 OXR1Q8N573 874 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.16□□□□□ -0.94
HMGN1-201ENST00000288344 CXorf40AQ8TE69 158 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 SKA1Q96BD8 255 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 RTP4Q96DX8 246 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 DTD2Q96FN9 168 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 MRGPRX2Q96LB1 330 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 RBM15Q96T37 977 aaKnown RBP eCLIP9.16□□□□□ -0.94
HMGN1-201ENST00000288344 TSGA10Q9BZW7 698 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 CLPBQ9H078 707 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 ABCG8Q9H221 673 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 TCEAL2Q9H3H9 227 aaPredicted RBP9.16□□□□□ -0.94
HMGN1-201ENST00000288344 MAGEE1Q9HCI5 957 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 GUCA1BQ9UMX6 200 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 PCDHGA11Q9Y5H2 935 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 ST14Q9Y5Y6 855 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 RP1P56715 2156 aa9.16□□□□□ -0.94
HMGN1-201ENST00000288344 COL27A1Q8IZC6 1860 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-201ENST00000288344 SPAARA0A1B0GVQ0 90 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 C5orf60A6NFR6 353 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 TMEM202A6NGA9 273 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 NEMP1O14524 444 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 AURKAO14965 403 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 SCAMP1O15126 338 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 YKT6O15498 198 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 MTSS1O43312 755 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 KRT86O43790 486 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 TJP3O95049 919 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 TOP3BO95985 862 aaKnown RBP9.15□□□□□ -0.94
HMGN1-201ENST00000288344 CCDC175P0C221 793 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 RBP3P10745 1247 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 ZNF30P17039 623 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 CTPS1P17812 591 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 ETV3P41162 512 aa9.15□□□□□ -0.94
HMGN1-201ENST00000288344 NOVA1P51513 510 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms