RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 LDLRP01130 860 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 PIRTP0C851 137 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 SLC7A1P30825 629 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 MAD2L1Q13257 205 aaPredicted RBP10.04□□□□□ -0.8
HMGCR-201ENST00000287936 SLC5A9Q2M3M2 681 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 CNPY1Q3B7I2 92 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 MS4A13Q5J8X5 152 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 FBXL22Q6P050 247 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 TERB1Q8NA31 727 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 KDM1BQ8NB78 822 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 C3orf58Q8NDZ4 430 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 VPS50Q96JG6 964 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 TMEM209Q96SK2 561 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 PAAF1Q9BRP4 392 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 C17orf80Q9BSJ5 609 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 MEAF6Q9HAF1 191 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 CRLS1Q9UJA2 301 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 ANAPC2Q9UJX6 822 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 RLFQ13129 1914 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 C16orf96A6NNT2 1141 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 HHLA1C9JL84 531 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 CCL22O00626 93 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 CLDN11O75508 207 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 CHRNA1P02708 482 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 ZNF7P17097 686 aaPredicted RBP10.04□□□□□ -0.8
HMGCR-201ENST00000287936 FGFR3P22607 806 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 ADAM17P78536 824 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 CHRNB3Q05901 458 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 NR6A1Q15406 480 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 ZNF423Q2M1K9 1284 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 PIGGQ5H8A4 983 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 HECTD3Q5T447 861 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 CACHD1Q5VU97 1274 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 RBM44Q6ZP01 1051 aaKnown RBP10.04□□□□□ -0.8
HMGCR-201ENST00000287936 KBTBD2Q8IY47 623 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 DIS3LQ8TF46 1054 aaKnown RBP10.04□□□□□ -0.8
HMGCR-201ENST00000287936 BDH2Q9BUT1 245 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 STARD7Q9NQZ5 370 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 AGO1Q9UL18 857 aaKnown RBP10.04□□□□□ -0.8
HMGCR-201ENST00000287936 BTRCQ9Y297 605 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 SLC27A5Q9Y2P5 690 aa10.04□□□□□ -0.8
HMGCR-201ENST00000287936 TMCC1O94876 653 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 EPOP01588 193 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 FLT3LGP49771 235 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 GNA12Q03113 381 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 CLCQ05315 142 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 CDH18Q13634 790 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 PABPC1LQ4VXU2 614 aaKnown RBP10.03□□□□□ -0.8
HMGCR-201ENST00000287936 GPRIN3Q6ZVF9 776 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 AMIGO2Q86SJ2 522 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 CLEC4FQ8N1N0 589 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 METTL6Q8TCB7 284 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 SH3GL1Q99961 368 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 ZCWPW1Q9H0M4 648 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 LATS2Q9NRM7 1088 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 TREX1Q9NSU2 369 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 TMLHEQ9NVH6 421 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 MCM3APO60318 1980 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 CCDC162PA2VCL2 907 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 MAP3K13O43283 966 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 RNASEH1O60930 286 aaKnown RBP10.03□□□□□ -0.8
HMGCR-201ENST00000287936 PKMP14618 531 aaKnown RBP10.03□□□□□ -0.8
HMGCR-201ENST00000287936 ZNF23P17027 643 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 AKT1P31749 480 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 ALDH7A1P49419 539 aaKnown RBP10.03□□□□□ -0.8
HMGCR-201ENST00000287936 CDH4P55283 916 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 PAOXQ6QHF9 649 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 FAM9CQ8IZT9 166 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 MARVELD2Q8N4S9 558 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 ZNF555Q8NEP9 628 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 FLRT1Q9NZU1 646 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 BLOC1S6Q9UL45 172 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 SNX5Q9Y5X3 404 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 SQORQ9Y6N5 450 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 ACSL4O60488 711 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 LINC00032P0C843 101 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 ACADVLP49748 655 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 ARHGDIAP52565 204 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 RHDQ02161 417 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 CEACAM7Q14002 265 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 LPIN1Q14693 890 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 C6orf52Q5T4I8 152 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 LPCAT2Q7L5N7 544 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 CARNMT1Q8N4J0 409 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 FAM156AQ8NDB6 213 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 OR4K2Q8NGD2 314 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 GPR152Q8TDT2 470 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 C2orf15Q8WU43 125 aaKnown RBP10.03□□□□□ -0.8
HMGCR-201ENST00000287936 APOL5Q9BWW9 433 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 CACNA2D2Q9NY47 1150 aa10.03□□□□□ -0.8
HMGCR-201ENST00000287936 E7ENX8 843 aa10.02□□□□□ -0.8
HMGCR-201ENST00000287936 H3BMM5 538 aa10.02□□□□□ -0.8
HMGCR-201ENST00000287936 STX16-NPEPL1H3BU86 382 aa10.02□□□□□ -0.8
HMGCR-201ENST00000287936 UBXN8O00124 270 aa10.02□□□□□ -0.8
HMGCR-201ENST00000287936 CLOCKO15516 846 aa10.02□□□□□ -0.8
HMGCR-201ENST00000287936 MBL2P11226 248 aaPredicted RBP10.02□□□□□ -0.8
HMGCR-201ENST00000287936 HOXC13P31276 330 aa10.02□□□□□ -0.8
HMGCR-201ENST00000287936 NUMBP49757 651 aa10.02□□□□□ -0.8
HMGCR-201ENST00000287936 ZNF678Q5SXM1 525 aa10.02□□□□□ -0.8
HMGCR-201ENST00000287936 OR52E8Q6IFG1 317 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms