RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CD2P06729 351 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 SLC6A3Q01959 620 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 KCNT2Q6UVM3 1135 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 SNX33Q8WV41 574 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 A0A075B6Q4 140 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 ZSCAN5CA6NGD5 496 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 SNAPC5O75971 98 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 TNFRSF8P28908 595 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 RHEBQ15382 184 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 RNF43Q68DV7 783 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 ANKRD13AQ8IZ07 590 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 PCDH20Q8N6Y1 951 aaKnown RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 HJURPQ8NCD3 748 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 CRAMP1Q96RY5 1269 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 POLR3HQ9Y535 204 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 TRPV2Q9Y5S1 764 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 GAKO14976 1311 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 ZBTB7AO95365 584 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 RPL21P46778 160 aaKnown RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 MASP1P48740 699 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 TUFMP49411 452 aaKnown RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF155Q12901 538 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 SNAPC1Q16533 368 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 FAM171A1Q5VUB5 890 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 TAPT1Q6NXT6 567 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 ZSWIM2Q8NEG5 633 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 GFM1Q96RP9 751 aaKnown RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 GPSM3Q9Y4H4 160 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 MAU2Q9Y6X3 613 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 GRIN3BO60391 1043 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 TSPAN3O60637 253 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 TSHRP16473 764 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 YBX3P16989 372 aaKnown RBP eCLIP8.73□□□□□ -1.011e-6■■□□□ 11.7
NIPBL-201ENST00000282516 PVALBP20472 110 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 AXLP30530 894 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 HNF4AP41235 474 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 MANFP55145 182 aaKnown RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 ARPC4P59998 168 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 RAB10P61026 200 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 ERVK-24P63145 666 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 HSDL1Q3SXM5 330 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 ZCCHC23Q6ZST2 131 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 CHSY3Q70JA7 882 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 PNLDC1Q8NA58 520 aaKnown RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 PHC3Q8NDX5 983 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 ETNPPLQ8TBG4 499 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 HPF1Q9NWY4 346 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 NKIRAS2Q9NYR9 191 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 CEP170Q5SW79 1584 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 IGKV5-2P06315 115 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 IST1P53990 364 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 CBX2Q14781 532 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 PRAMEF17Q5VTA0 474 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 HELQQ8TDG4 1101 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 PPP1R13LQ8WUF5 828 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 CELF2O95319 508 aaKnown RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 CXCL8P10145 99 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 TXNL4AP83876 142 aaKnown RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 FSCN1Q16658 493 aaKnown RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 FBXO16Q8IX29 292 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 C11orf65Q8NCR3 313 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 HASPINQ8TF76 798 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 NXPE2Q96DL1 559 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 RTKNQ9BST9 563 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 TMEM27Q9HBJ8 222 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 SMPD4Q9NXE4 827 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 ZDHHC9Q9Y397 364 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 AP4B1Q9Y6B7 739 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 RFXANKO14593 260 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 ADAMDEC1O15204 470 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 TLX3O43711 291 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 IGFBP5P24593 272 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 FAM46CQ5VWP2 391 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 DET1Q7L5Y6 550 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 SCGB3A2Q96PL1 93 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 MCMBPQ9BTE3 642 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 LGR4Q9BXB1 951 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 IDI2Q9BXS1 227 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 PCDHGB1Q9Y5G3 927 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 C2orf71A6NGG8 1288 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 H3BQF6 201 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 CACNB4O00305 520 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 TSPAN1O60635 241 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 UNC5CO95185 931 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 LRATO95237 230 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 MATN4O95460 622 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 VTNP04004 478 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 USP17L7P0C7H9 530 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 CAV3P56539 151 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 PPP3CAQ08209 521 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 RRP1BQ14684 758 aaKnown RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 CES3Q6UWW8 571 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 UTS2BQ765I0 119 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 NUP54Q7Z3B4 507 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF571Q7Z3V5 609 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 SLC41A1Q8IVJ1 513 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 NXF3Q9H4D5 531 aaKnown RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 NOL11Q9H8H0 719 aaKnown RBP8.72□□□□□ -1.01
NIPBL-201ENST00000282516 CARD8Q9Y2G2 431 aa8.72□□□□□ -1.01
NIPBL-201ENST00000282516 NFASCO94856 1347 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms