RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CCDC117Q8IWD4 279 aaPredicted RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CMTM8Q8IZV2 173 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 NAT16Q8N8M0 369 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 BRSK1Q8TDC3 778 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 NRG4Q8WWG1 115 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 SPATA17Q96L03 361 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 APOL5Q9BWW9 433 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 MAGEH1Q9H213 219 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 EBF2Q9HAK2 575 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 MRPL17Q9NRX2 175 aaKnown RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 HCFC1R1Q9NWW0 138 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 DNAJC28Q9NX36 388 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 NDE1Q9NXR1 346 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 ZNF212Q9UDV6 495 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CDH22Q9UJ99 828 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 SH3BP1Q9Y3L3 701 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 A0A087X1B8 175 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 A0A088AWK7 358 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 FAM92AA1XBS5 289 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 WASH4PA8MWX3 477 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 SLC7A4O43246 635 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 SMIM24O75264 130 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 RFPL2O75678 378 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 ZNF189O75820 626 aaPredicted RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CRTAMO95727 393 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 LINC00032P0C843 101 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 UBTFL6P0CB48 400 aaPredicted RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 AOC1P19801 751 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 LEPRP48357 1165 aaKnown RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 FOXA1P55317 472 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 MRPS22P82650 360 aaKnown RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 ARF5P84085 180 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 SULT2A1Q06520 285 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 RING1Q06587 406 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 RPS6KA2Q15349 733 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 OR4D1Q15615 310 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 TECRLQ5HYJ1 363 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 LRRC74BQ6ZQY2 392 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 LYSMD3Q7Z3D4 306 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 PIWIL4Q7Z3Z4 852 aaKnown RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 BBS7Q8IWZ6 715 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CPNE9Q8IYJ1 553 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 PTCD2Q8WV60 388 aaKnown RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CDK15Q96Q40 435 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 PSKH2Q96QS6 385 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 SLC30A3Q99726 388 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 DDX50Q9BQ39 737 aaKnown RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 MFSD1Q9H3U5 465 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CWH43Q9H720 699 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 VPS51Q9UID3 782 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 COPG1Q9Y678 874 aaKnown RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 C1orf232A0A0U1RR37 186 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 A0A1B0GTL3 188 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 LOC285095A0A1B0GVY8 99 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CCDC189A1A4V9 331 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 TMEM114B3SHH9 223 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 KATNA1O75449 491 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 IL1BP01584 269 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 IGLV3-27P01718 113 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 LRG1P02750 347 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 SOD2P04179 222 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 RBP1P09455 135 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 COL6A1P12109 1028 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CPOXP36551 454 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 PIK3CGP48736 1102 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 BTKQ06187 659 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 SLC34A1Q06495 639 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CBX2Q14781 532 aaPredicted RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CYTH1Q15438 398 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 TRIP10Q15642 601 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 SWT1Q5T5J6 900 aaKnown RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 WLSQ5T9L3 541 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 IZUMO2Q6UXV1 221 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CYP2R1Q6VVX0 501 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 ISCA2Q86U28 154 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 SPATA24Q86W54 205 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 IFNEQ86WN2 208 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CNTN4Q8IWV2 1026 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 ZNF366Q8N895 744 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 KDM1BQ8NB78 822 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 GRIN3AQ8TCU5 1115 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 MRPS31Q92665 395 aaKnown RBP6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 ATP6V1E2Q96A05 226 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 ISL2Q96A47 359 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 TUBGCP3Q96CW5 907 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 FEM1CQ96JP0 617 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 PPP1R2P1Q96PQ5 205 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 PIF1Q9H611 641 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 IL37Q9NZH6 218 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 CD274Q9NZQ7 290 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 MCM8Q9UJA3 840 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 INSL5Q9Y5Q6 135 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 SLC30A1Q9Y6M5 507 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 MYOFQ9NZM1 2061 aa6.04□□□□□ -1.44
TNFSF4-201ENST00000281834 THSD7BQ9C0I4 1608 aa6.03□□□□□ -1.44
TNFSF4-201ENST00000281834 ANKRD66B4E2M5 251 aa6.03□□□□□ -1.44
TNFSF4-201ENST00000281834 NRG2O14511 850 aaPredicted RBP6.03□□□□□ -1.44
TNFSF4-201ENST00000281834 GIPC1O14908 333 aa6.03□□□□□ -1.44
TNFSF4-201ENST00000281834 TRIM24O15164 1050 aa6.03□□□□□ -1.44
TNFSF4-201ENST00000281834 UBDO15205 165 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms