RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 HEXDCQ8WVB3 486 aa15.31■□□□□ 0.04
SF3B4-201ENST00000271628 TCEAL4Q96EI5 215 aa15.31■□□□□ 0.04
SF3B4-201ENST00000271628 RILPQ96NA2 401 aa15.31■□□□□ 0.04
SF3B4-201ENST00000271628 LBHD1Q9BQE6 289 aaPredicted RBP15.31■□□□□ 0.04
SF3B4-201ENST00000271628 SMG9Q9H0W8 520 aaKnown RBP15.31■□□□□ 0.04
SF3B4-201ENST00000271628 MAGEE1Q9HCI5 957 aa15.31■□□□□ 0.04
SF3B4-201ENST00000271628 TBC1D14Q9P2M4 693 aa15.31■□□□□ 0.04
SF3B4-201ENST00000271628 H7C0S8 307 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 ZNF197O14709 1029 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 STX7O15400 261 aaKnown RBP15.3■□□□□ 0.04
SF3B4-201ENST00000271628 MOSPD3O75425 235 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 CCDC166P0CW27 439 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 SYN1P17600 705 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 ABL2P42684 1182 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 PGGT1BP53609 377 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 BCL2L1Q07817 233 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 DLG1Q12959 904 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 CSHL1Q14406 222 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 TBCCQ15814 346 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 ELMSAN1Q6PJG2 1045 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 TMPRSS6Q8IU80 811 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 C19orf43Q9BQ61 176 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 GATA5Q9BWX5 397 aaPredicted RBP15.3■□□□□ 0.04
SF3B4-201ENST00000271628 NMUR2Q9GZQ4 415 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 DRC3Q9H069 523 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 ZDHHC7Q9NXF8 308 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 CLEC4EQ9ULY5 219 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 SORCS3Q9UPU3 1222 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 CCL26Q9Y258 94 aa15.3■□□□□ 0.04
SF3B4-201ENST00000271628 K7ERQ8 282 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 SOCS5O75159 536 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 PGLSO95336 258 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 IGSF6O95976 241 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 ALOX15P16050 662 aaPredicted RBP15.29■□□□□ 0.04
SF3B4-201ENST00000271628 ACADSP16219 412 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 ATP5F1P24539 256 aaPredicted RBP15.29■□□□□ 0.04
SF3B4-201ENST00000271628 CD70P32970 193 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 CAMK1Q14012 370 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 ATXN7L2Q5T6C5 722 aaPredicted RBP15.29■□□□□ 0.04
SF3B4-201ENST00000271628 RINLQ6ZS11 566 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 SAMD11Q96NU1 681 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 TM6SF2Q9BZW4 377 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 ILKAPQ9H0C8 392 aaPredicted RBP15.29■□□□□ 0.04
SF3B4-201ENST00000271628 IGSF5Q9NSI5 407 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 DNAJC28Q9NX36 388 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 APOBEC2Q9Y235 224 aaKnown RBP15.29■□□□□ 0.04
SF3B4-201ENST00000271628 PKP3Q9Y446 797 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 CAPN14A8MX76 684 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 H0Y3Z8 333 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 GRM6O15303 877 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 MAGEC1O60732 1142 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 CLASP2O75122 1294 aaKnown RBP15.29■□□□□ 0.04
SF3B4-201ENST00000271628 POU2F2P09086 479 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 EPCAMP16422 314 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 FDXRP22570 491 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 IRS1P35568 1242 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 HMGCLP35914 325 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 SERPINB5P36952 375 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 VHLP40337 213 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 TTPAP49638 278 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 NAGLUP54802 743 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 HSF5Q4G112 596 aaPredicted RBP15.29■□□□□ 0.04
SF3B4-201ENST00000271628 PITRM1Q5JRX3 1037 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 NAPRTQ6XQN6 538 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 KIRREL3Q8IZU9 778 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 EFHBQ8N7U6 833 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 ISG20Q96AZ6 181 aaKnown RBP15.29■□□□□ 0.04
SF3B4-201ENST00000271628 OTUB2Q96DC9 234 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 MYO19Q96H55 970 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 MCOLN1Q9GZU1 580 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 CCDC68Q9H2F9 335 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 ATP13A3Q9H7F0 1226 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 NCKIPSDQ9NZQ3 722 aa15.29■□□□□ 0.04
SF3B4-201ENST00000271628 INTS6Q9UL03 887 aaKnown RBP15.29■□□□□ 0.04
SF3B4-201ENST00000271628 HTRA2O43464 458 aaPredicted RBP15.28■□□□□ 0.04
SF3B4-201ENST00000271628 SMAD6O43541 496 aaKnown RBP15.28■□□□□ 0.04
SF3B4-201ENST00000271628 DLX3O60479 287 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 NDUFS3O75489 264 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 SMNDC1O75940 238 aaKnown RBP eCLIP15.28■□□□□ 0.04
SF3B4-201ENST00000271628 WISP3O95389 354 aaPredicted RBP15.28■□□□□ 0.04
SF3B4-201ENST00000271628 PENKP01210 267 aaPredicted RBP15.28■□□□□ 0.04
SF3B4-201ENST00000271628 SERPINA6P08185 405 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 TCF3P15923 654 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 SUOXP51687 545 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 RAP1GDS1P52306 607 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 CDKN2DP55273 166 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 DNAJB13P59910 316 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 SNRPD1P62314 119 aaKnown RBP15.28■□□□□ 0.04
SF3B4-201ENST00000271628 RCN2Q14257 317 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 SEMA3AQ14563 771 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 CCDC6Q16204 474 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 TECRLQ5HYJ1 363 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 AARS2Q5JTZ9 985 aaKnown RBP15.28■□□□□ 0.04
SF3B4-201ENST00000271628 TTC7BQ86TV6 843 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 SPATA6LQ8N4H0 392 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 TTC30BQ8N4P2 665 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 OR2AP1Q8NGE2 309 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 IRF7Q92985 503 aa15.28■□□□□ 0.04
SF3B4-201ENST00000271628 PRR11Q96HE9 360 aaPredicted RBP15.28■□□□□ 0.04
SF3B4-201ENST00000271628 LMLNQ96KR4 655 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms