RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 CYP4X1Q8N118 509 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 BEND7Q8N7W2 519 aaPredicted RBP13.71□□□□□ -0.21
NPC1-201ENST00000269228 USP7Q93009 1102 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 C1orf50Q9BV19 199 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 FKBPLQ9UIM3 349 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 BTAF1O14981 1849 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 EPN2O95208 641 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 LINC00032P0C843 101 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 PABPC1P11940 636 aaKnown RBP13.71□□□□□ -0.21
NPC1-201ENST00000269228 FECHP22830 423 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 ITPKAP23677 461 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 PTGIRP43119 386 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 CHRNA4P43681 627 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 HSPA13P48723 471 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 CCDC85BQ15834 202 aaPredicted RBP13.71□□□□□ -0.21
NPC1-201ENST00000269228 OLFML1Q6UWY5 402 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 IQCKQ8N0W5 287 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 PCDH12Q9NPG4 1184 aa13.71□□□□□ -0.21
NPC1-201ENST00000269228 KRT87PA6NCN2 255 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 SOD2P04179 222 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 CYBAP13498 195 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 NRIP1P48552 1158 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 RPS7P62081 194 aaKnown RBP13.71□□□□□ -0.22
NPC1-201ENST00000269228 RAB30Q15771 203 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 C2orf27AQ580R0 203 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 PPM1JQ5JR12 505 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 IRAK1BP1Q5VVH5 260 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 C2orf73Q8N5S3 287 aaPredicted RBP13.71□□□□□ -0.22
NPC1-201ENST00000269228 RIN3Q8TB24 985 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 POF1BQ8WVV4 589 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 IGSF21Q96ID5 467 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 CLIC5Q9NZA1 410 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 GULP1Q9UBP9 304 aa13.71□□□□□ -0.22
NPC1-201ENST00000269228 FKBP6O75344 327 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 SERPINI2O75830 405 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 ZMPSTE24O75844 475 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 HAPLN1P10915 354 aaPredicted RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 ATP6V1B1P15313 513 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 MAT2AP31153 395 aaKnown RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 NAA20P61599 178 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 FAM182AQ5T1J6 154 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 TMEM154Q6P9G4 183 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 CMASQ8NFW8 434 aaPredicted RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 NXNL1Q96CM4 212 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 RNF145Q96MT1 663 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 ARMC7Q9H6L4 198 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 ATAD3AQ9NVI7 634 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 PRKAG3Q9UGI9 489 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 SCML2Q9UQR0 700 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 INSL5Q9Y5Q6 135 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 RASSF10A6NK89 507 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 SLC31A1O15431 190 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 GPR32O75388 356 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 IFNA16P05015 189 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 FASP25445 335 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 SOX4Q06945 474 aaPredicted RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 SAMD4BQ5PRF9 694 aaKnown RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 ZCCHC8Q6NZY4 707 aaKnown RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 SMG8Q8ND04 991 aaKnown RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 CLIP3Q96DZ5 547 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 hCG_2014768A0A024R1R8 64 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 C15orf38-AP3S2A0A0A6YYH1 394 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 GOT2P00505 430 aaKnown RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 FCGR1AP12314 374 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 GDI1P31150 447 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 USP4Q13107 963 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 DRICH1Q6PGQ1 229 aaPredicted RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 VITQ6UXI7 678 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 ARPINQ7Z6K5 226 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 ZBTB2Q8N680 514 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 ZSCAN18Q8TBC5 510 aaPredicted RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 BTN2A2Q8WVV5 523 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 CLP1Q92989 425 aaKnown RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 RERGQ96A58 199 aaPredicted RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 TADA1Q96BN2 335 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 KRT84Q9NSB2 600 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 FAM47E-STBD1D6RA91 191 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 METTL18O95568 372 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 IQCF3P0C7M6 154 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 GRSF1Q12849 480 aaKnown RBP eCLIP13.7□□□□□ -0.22
NPC1-201ENST00000269228 MORN1Q5T089 497 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 OTUD3Q5T2D3 398 aaPredicted RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 GRASPQ7Z6J2 395 aaPredicted RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 CLYBLQ8N0X4 340 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 SH3GL3Q99963 347 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 OSBPL2Q9H1P3 480 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 ACSS2Q9NR19 701 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 SAR1AQ9NR31 198 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 CIDEBQ9UHD4 219 aa13.7□□□□□ -0.22
NPC1-201ENST00000269228 MRPS17Q9Y2R5 130 aaKnown RBP13.7□□□□□ -0.22
NPC1-201ENST00000269228 HNRNPH1P31943 449 aaKnown RBP13.69□□□□□ -0.22
NPC1-201ENST00000269228 OGDHQ02218 1023 aa13.69□□□□□ -0.22
NPC1-201ENST00000269228 UPP1Q16831 310 aa13.69□□□□□ -0.22
NPC1-201ENST00000269228 SERPINA9Q86WD7 417 aa13.69□□□□□ -0.22
NPC1-201ENST00000269228 LEMD2Q8NC56 503 aa13.69□□□□□ -0.22
NPC1-201ENST00000269228 VMP1Q96GC9 406 aa13.69□□□□□ -0.22
NPC1-201ENST00000269228 EVA1BQ9NVM1 165 aa13.69□□□□□ -0.22
NPC1-201ENST00000269228 PNPOQ9NVS9 261 aa13.69□□□□□ -0.22
NPC1-201ENST00000269228 IGSF9Q9P2J2 1179 aa13.69□□□□□ -0.22
NPC1-201ENST00000269228 DNAJC25-GNG10A0A024R161 153 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms