RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 ZNF564Q8TBZ8 553 aaPredicted RBP9.73□□□□□ -0.85
VPS41-201ENST00000265745 PIH1D2Q8WWB5 315 aa9.73□□□□□ -0.85
VPS41-201ENST00000265745 CCDC74AQ96AQ1 378 aa9.73□□□□□ -0.85
VPS41-201ENST00000265745 NAF1Q96HR8 494 aaKnown RBP9.73□□□□□ -0.85
VPS41-201ENST00000265745 UBL7Q96S82 380 aaPredicted RBP9.73□□□□□ -0.85
VPS41-201ENST00000265745 LGMNQ99538 433 aa9.73□□□□□ -0.85
VPS41-201ENST00000265745 TEX101Q9BY14 249 aa9.73□□□□□ -0.85
VPS41-201ENST00000265745 TMEM168Q9H0V1 697 aa9.73□□□□□ -0.85
VPS41-201ENST00000265745 CYP4F12Q9HCS2 524 aa9.73□□□□□ -0.85
VPS41-201ENST00000265745 NT5MQ9NPB1 228 aa9.73□□□□□ -0.85
VPS41-201ENST00000265745 THSD1Q9NS62 852 aa9.73□□□□□ -0.85
VPS41-201ENST00000265745 KCTD5Q9NXV2 234 aa9.73□□□□□ -0.85
VPS41-201ENST00000265745 APPL1Q9UKG1 709 aa9.73□□□□□ -0.85
VPS41-201ENST00000265745 PPIL1Q9Y3C6 166 aa9.73□□□□□ -0.85
VPS41-201ENST00000265745 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.73□□□□□ -0.853e-8■■□□□ 13.8
VPS41-201ENST00000265745 LOC400499M0QZD8 3231 aa9.73□□□□□ -0.85
VPS41-201ENST00000265745 PMS2P1A4D2B8 440 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 CDRT15L2A8MXV6 281 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 PSMD11O00231 422 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 MATN3O15232 486 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 FZD6O60353 706 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 NOBOXO60393 691 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 PROSCO94903 275 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 CPP00450 1065 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 CEACAM5P06731 702 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 PDHA1P08559 390 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 CYP2A6P11509 494 aaPredicted RBP9.72□□□□□ -0.85
VPS41-201ENST00000265745 MYCLP1P12525 358 aaPredicted RBP9.72□□□□□ -0.85
VPS41-201ENST00000265745 GLB1P16278 677 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 GARSP41250 739 aaKnown RBP9.72□□□□□ -0.85
VPS41-201ENST00000265745 TAS2R40P59535 323 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 SKOR1P84550 965 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 DPYSL3Q14195 570 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 IHHQ14623 411 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 PAFAH1B3Q15102 231 aaKnown RBP9.72□□□□□ -0.85
VPS41-201ENST00000265745 PDK2Q15119 407 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 SLC18A3Q16572 532 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 ASTE1Q2TB18 679 aaPredicted RBP9.72□□□□□ -0.85
VPS41-201ENST00000265745 ZSCAN23Q3MJ62 389 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 ANKRD20A8PQ5CZ79 823 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 C3orf38Q5JPI3 329 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 CERCAMQ5T4B2 595 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 DENND2CQ68D51 928 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 NCBP2-AS2Q69YL0 99 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 ALG1LQ6GMV1 187 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 Q6ZVL8 140 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 TECPR1Q7Z6L1 1165 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 TSPAN33Q86UF1 283 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 SFTPA2Q8IWL1 248 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 KCTD6Q8NC69 237 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 OR8K1Q8NGG5 319 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 CCL4L1Q8NHW4 92 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 WDR36Q8NI36 951 aaKnown RBP9.72□□□□□ -0.85
VPS41-201ENST00000265745 GPBAR1Q8TDU6 330 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 MAML1Q92585 1016 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 FATE1Q969F0 183 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 NUS1Q96E22 293 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 DTD2Q96FN9 168 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 FCRL3Q96P31 734 aaPredicted RBP9.72□□□□□ -0.85
VPS41-201ENST00000265745 TSGA13Q96PP4 275 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 SEMA3CQ99985 751 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 ARHGAP9Q9BRR9 750 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 XPO4Q9C0E2 1151 aaKnown RBP9.72□□□□□ -0.85
VPS41-201ENST00000265745 CTTNBP2NLQ9P2B4 639 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 UVRAGQ9P2Y5 699 aa9.72□□□□□ -0.85
VPS41-201ENST00000265745 NYNRINQ9P2P1 1898 aaKnown RBP9.72□□□□□ -0.85
VPS41-201ENST00000265745 PTPRQQ9UMZ3 2332 aa9.71□□□□□ -0.85
VPS41-201ENST00000265745 CCDC187A0A096LP49 1063 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 A0A0U1RQS6 177 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 PRSS38A1L453 326 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 D6RAR5 112 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 TMX2-CTNND1H3BSU7 103 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 MFSD11O43934 449 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 TNFSF15O95150 251 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 PRLP01236 227 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 RPLP0P05388 317 aaKnown RBP9.71□□□□□ -0.86
VPS41-201ENST00000265745 H2AFZP0C0S5 128 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 PNLIPP16233 465 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 CTPS1P17812 591 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 CES1P23141 567 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 CCNCP24863 283 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 TEAD1P28347 426 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 CDK3Q00526 305 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 PTSQ03393 145 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 ZFP36L1Q07352 338 aaKnown RBP9.71□□□□□ -0.86
VPS41-201ENST00000265745 DPTQ07507 201 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 ITKQ08881 620 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 ARHGEF7Q14155 803 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 HLTFQ14527 1009 aaKnown RBP eCLIP9.71□□□□□ -0.86
VPS41-201ENST00000265745 SPECC1LQ69YQ0 1117 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 RFLNAQ6ZTI6 216 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 USP45Q70EL2 814 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 H2AFVQ71UI9 128 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 GPR155Q7Z3F1 870 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 B3GNT8Q7Z7M8 397 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 HEATR4Q86WZ0 1026 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 C17orf82Q86X59 251 aaPredicted RBP9.71□□□□□ -0.86
VPS41-201ENST00000265745 NRROSQ86YC3 692 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 MAP7D3Q8IWC1 876 aa9.71□□□□□ -0.86
VPS41-201ENST00000265745 ARL14Q8N4G2 192 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms