RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 CLNKQ7Z7G1 428 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 CAND1Q86VP6 1230 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 APLFQ8IW19 511 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 WDR75Q8IWA0 830 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 RGL4Q8IZJ4 473 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 NDUFAF2Q8N183 169 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 KIF2BQ8N4N8 673 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 TEX9Q8N6V9 391 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 IL17RCQ8NAC3 791 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 GABPB2Q8TAK5 448 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 CCDC110Q8TBZ0 833 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 AGAP11Q8TF27 550 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 STMN2Q93045 179 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 NTAN1Q96AB6 310 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 SIGLEC10Q96LC7 697 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 TSNARE1Q96NA8 513 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 CYP2S1Q96SQ9 504 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 KLF6Q99612 283 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 TBC1D10AQ9BXI6 508 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 TMEM120AQ9BXJ8 343 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 LINC00597Q9H2U6 94 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 LRRC40Q9H9A6 602 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 RNPEPL1Q9HAU8 725 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 CD93Q9NPY3 652 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 THAP1Q9NVV9 213 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 GEMIN8Q9NWZ8 242 aaKnown RBP7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 ABI2Q9NYB9 513 aaPredicted RBP7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 BFARQ9NZS9 450 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 SLC17A7Q9P2U7 560 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 STOML1Q9UBI4 398 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 DCTN4Q9UJW0 460 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 TRHDEQ9UKU6 1024 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 KNL1Q8NG31 2342 aa7.1□□□□□ -1.27
SMARCE1-201ENST00000264640 CABIN1Q9Y6J0 2220 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 TEP1Q99973 2627 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 PLK4O00444 970 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 LIN7AO14910 233 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 HGSO14964 777 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 TLX3O43711 291 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 F11P03951 625 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 MPOP05164 745 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 APOA4P06727 396 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 CKMP06732 381 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 BPGMP07738 259 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 CCDC130P13994 396 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 HMGA1P17096 107 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 PTPN1P18031 435 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 HTR7P34969 479 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 SPRP35270 261 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 SLC6A11P48066 632 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 NPY2RP49146 381 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 CLNS1AP54105 237 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 PRKAA2P54646 552 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 CLDN6P56747 220 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 PDE1BQ01064 536 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 ASPHQ12797 758 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 ILF2Q12905 390 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 SLC14A1Q13336 389 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 PAFAH1B3Q15102 231 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 CA9Q16790 459 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 CCDC153Q494R4 210 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 CMPK2Q5EBM0 449 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 ANKRD20A2Q5SQ80 823 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 ANKRD20A1Q5TYW2 823 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 TRNP1Q6NT89 227 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 GLRX5Q86SX6 157 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 C12orf40Q86WS4 652 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 METTL23Q86XA0 190 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 IGDCC3Q8IVU1 814 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 LMNTD2Q8IXW0 634 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 DEFB106AQ8N104 65 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 SVOPQ8N4V2 548 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 FAM181AQ8N9Y4 354 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 B3GALNT2Q8NCR0 500 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 CCNYQ8ND76 341 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 SLC2A14Q8TDB8 520 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 RNF139Q8WU17 664 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 MRPS31Q92665 395 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 N4BP2L2Q92802 583 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 THOC1Q96FV9 657 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 OXNAD1Q96HP4 312 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 SERAC1Q96JX3 654 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 VAT1Q99536 393 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 CPNE1Q99829 537 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 SLC13A1Q9BZW2 595 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 CNGB3Q9NQW8 809 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 DTLQ9NZJ0 730 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 SIRPGQ9P1W8 387 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 CYP8B1Q9UNU6 501 aa7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 FNDC3AQ9Y2H6 1198 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-201ENST00000264640 KNTC1P50748 2209 aa7.08□□□□□ -1.28
SMARCE1-201ENST00000264640 UBR5O95071 2799 aaPredicted RBP7.08□□□□□ -1.28
SMARCE1-201ENST00000264640 IGHV1OR15-9A0A0B4J2B8 117 aa7.08□□□□□ -1.28
SMARCE1-201ENST00000264640 GOLGA8QA0A0J9YX86 632 aa7.08□□□□□ -1.28
SMARCE1-201ENST00000264640 GOLGA8OA6NCC3 632 aa7.08□□□□□ -1.28
SMARCE1-201ENST00000264640 C2orf78A6NCI8 922 aa7.08□□□□□ -1.28
SMARCE1-201ENST00000264640 GOLGA8NF8WBI6 632 aa7.08□□□□□ -1.28
SMARCE1-201ENST00000264640 M0QYT0 321 aa7.08□□□□□ -1.28
SMARCE1-201ENST00000264640 RNF103O00237 685 aa7.08□□□□□ -1.28
SMARCE1-201ENST00000264640 FCHO1O14526 889 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms