RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 FAM124AQ86V42 546 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 KCNMB4Q86W47 210 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 RASSF3Q86WH2 238 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 NDUFAF2Q8N183 169 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 HCAR2Q8TDS4 363 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 STYXQ8WUJ0 223 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 SPOCK2Q92563 424 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 PBXIP1Q96AQ6 731 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 SIPA1Q96FS4 1042 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 CERS2Q96G23 380 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 CDKN2AIPNLQ96HQ2 116 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 PPP1R16AQ96I34 528 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 HHIPQ96QV1 700 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 LYSMD1Q96S90 227 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 OMDQ99983 421 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 HDAC8Q9BY41 377 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 ACSS3Q9H6R3 686 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 FBXL12Q9NXK8 326 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 HACD3Q9P035 362 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 MARCH4Q9P2E8 410 aaPredicted RBP9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 PSAT1Q9Y617 370 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 TECTAO75443 2155 aa9.73□□□□□ -0.85
SNRNP40-201ENST00000263694 A0A1W2PQ67 120 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 PRR23AA6NEV1 266 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 NEMP1O14524 444 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 AREL1O15033 823 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 PI15O43692 258 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 MMP20O60882 483 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 RPP40O75818 363 aaKnown RBP9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 PAPSS2O95340 614 aaPredicted RBP9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 DNTTP04053 509 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 GSTA2P09210 222 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 CYP2A6P11509 494 aaPredicted RBP9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 BPIP17213 487 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 GM2AP17900 193 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 C5AR1P21730 350 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 STX2P32856 288 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 HMGCLP35914 325 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 PXNP49023 591 aaPredicted RBP9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 LIG3P49916 1009 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 PRAMEP78395 509 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 ACVR1Q04771 509 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 PEX6Q13608 980 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 ARHGEF7Q14155 803 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 SEMA3AQ14563 771 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 TEDDM1Q5T9Z0 273 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 AGBL4Q5VU57 503 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 KIAA0930Q6ICG6 404 aaPredicted RBP9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 ERAP2Q6P179 960 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 FAM151BQ6UXP7 276 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 LIPIQ6XZB0 460 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 Q6ZVL8 140 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 DPPA4Q7L190 304 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 NLRP9Q7RTR0 991 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 DENND6AQ8IWF6 608 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 CYP4X1Q8N118 509 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 PGBD3Q8N328 593 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 GPR26Q8NDV2 337 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 PJA1Q8NG27 643 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 CYTH2Q99418 400 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 NELL2Q99435 816 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 CENPHQ9H3R5 247 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 TRABDQ9H4I3 376 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 TBK1Q9UHD2 729 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 PKP3Q9Y446 797 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 FADS3Q9Y5Q0 445 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 BPTFQ12830 3046 aa9.72□□□□□ -0.85
SNRNP40-201ENST00000263694 CHURC1-FNTBB4DL54 471 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 GAPDHSO14556 408 aaPredicted RBP9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 RASGRF2O14827 1237 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 SPAG6O75602 509 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 UGT1A6P19224 532 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 UGT1A1P22309 533 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 UGT1A4P22310 534 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 MC4RP32245 332 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 UGT1A3P35503 534 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 UGT1A5P35504 534 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 ETV3P41162 512 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 STC1P52823 247 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 XIAPP98170 497 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 MPP1Q00013 466 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 MGAT5Q09328 741 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 STAT4Q14765 748 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 ACOX1Q15067 660 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 KRT71Q3SY84 523 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 HSF5Q4G112 596 aaPredicted RBP9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 ZNF789Q5FWF6 425 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 TJAP1Q5JTD0 557 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 PDPK2PQ6A1A2 396 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 NEPROQ6NW34 567 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 LRIG3Q6UXM1 1119 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 SYT13Q7L8C5 426 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 CBARPQ8N350 705 aaPredicted RBP9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 SYNPOQ8N3V7 929 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 NAT14Q8WUY8 206 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 KLK6Q92876 244 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 SCAMP4Q969E2 229 aa9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 UHRF1Q96T88 793 aaPredicted RBP9.71□□□□□ -0.85
SNRNP40-201ENST00000263694 PAFAH2Q99487 392 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms