RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 MS4A13Q5J8X5 152 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 SLC44A2Q8IWA5 706 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 TEX26Q8N6G2 289 aa8.24□□□□□ -1.09
PTPN3-201ENST00000262539 ZNF641Q96N77 438 aaPredicted RBP8.24□□□□□ -1.09
PTPN3-201ENST00000262539 FCHO1O14526 889 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 INSIG1O15503 277 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 TCF4P15884 667 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 PLK1P53350 603 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 FPGSQ05932 587 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 DDX39BQ13838 428 aaKnown RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 PDGFRLQ15198 375 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 CNGA3Q16281 694 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 CLLU1OSQ5K130 101 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 TMEM63BQ5T3F8 832 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 C1orf146Q5VVC0 180 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 FAM46CQ5VWP2 391 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ZFP1Q6P2D0 407 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 OR56A4Q8NGH8 313 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 RP9Q8TA86 221 aaKnown RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 PIWIL1Q96J94 861 aaKnown RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 PRICKLE1Q96MT3 831 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 OSBPL1AQ9BXW6 950 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 DNAAF2Q9NVR5 837 aaKnown RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 SYBUQ9NX95 663 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 GGT7Q9UJ14 662 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 TEX28O15482 410 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 SRP72O76094 671 aaKnown RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 MRPL28Q13084 256 aaKnown RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 C16orf87Q6PH81 154 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 BRAT1Q6PJG6 821 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 HFE2Q6ZVN8 426 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 GALNT13Q8IUC8 556 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 RHEBL1Q8TAI7 183 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 BLOC1S5Q8TDH9 187 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ISG20Q96AZ6 181 aaKnown RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 CATSPERZQ9NTU4 200 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 COPG2Q9UBF2 871 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ARHGEF9O43307 516 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 KRT33AO76009 404 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ADH1CP00326 375 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 CTNNB1P35222 781 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 CUL3Q13618 768 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ACOX1Q15067 660 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 DNAJB7Q7Z6W7 309 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 CPNE8Q86YQ8 564 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ADAM32Q8TC27 787 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 OMDQ99983 421 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 OBP2AQ9NY56 170 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ZNF839A8K0R7 811 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 CBX4O00257 560 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 RAD51BO15315 384 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 TSPAN3O60637 253 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 CATP04040 527 aaKnown RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 PRNPP04156 253 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ETS1P14921 441 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 IL10P22301 178 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ANXA11P50995 505 aaKnown RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ALG1LQ6GMV1 187 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 FGD2Q7Z6J4 655 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 TRIM69Q86WT6 500 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 POMGNT2Q8NAT1 580 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 HCAR2Q8TDS4 363 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 UBE2E3Q969T4 207 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 PRPF18Q99633 342 aaKnown RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 MCM8Q9UJA3 840 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 GRXCR2A6NFK2 248 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 SEC24DO94855 1032 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 GSRP00390 522 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 DNAJB13P59910 316 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 CACNG1Q06432 222 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 GLIS1Q8NBF1 620 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 OR4L1Q8NH43 312 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ADNPQ9H2P0 1102 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 FBRSQ9HAH7 460 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 HEY2Q9UBP5 337 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 H0YC42 278 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 DNAJA2O60884 412 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 CORO1AP31146 461 aaKnown RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ETV4P43268 484 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ACADVLP49748 655 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 RAB30Q15771 203 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 USP39Q53GS9 565 aaKnown RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ZNF280BQ86YH2 543 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 CNTD1Q8N815 330 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 COPS8Q99627 209 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 RSPH9Q9H1X1 276 aaPredicted RBP8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ZDHHC4Q9NPG8 344 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 ATP6V1HQ9UI12 483 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 STOML2Q9UJZ1 356 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 N6AMT1Q9Y5N5 214 aa8.23□□□□□ -1.09
PTPN3-201ENST00000262539 NCF1BA6NI72 391 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-201ENST00000262539 NCF1CA8MVU1 366 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-201ENST00000262539 ENO1P06733 434 aaKnown RBP8.22□□□□□ -1.09
PTPN3-201ENST00000262539 OR56A5P0C7T3 313 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 NCF1P14598 390 aaPredicted RBP8.22□□□□□ -1.09
PTPN3-201ENST00000262539 GJA8P48165 433 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 AP1S2P56377 157 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 BBS7Q8IWZ6 715 aa8.22□□□□□ -1.09
PTPN3-201ENST00000262539 MRPL1Q9BYD6 325 aaKnown RBP8.22□□□□□ -1.09
PTPN3-201ENST00000262539 OSBPL6Q9BZF3 934 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms