RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 TFB1MQ8WVM0 346 aaKnown RBP13.4□□□□□ -0.26
SGCA-201ENST00000262018 CPT1BQ92523 772 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 TMA16Q96EY4 203 aaKnown RBP13.4□□□□□ -0.26
SGCA-201ENST00000262018 APOLD1Q96LR9 279 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 SEMA3CQ99985 751 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 DDX50Q9BQ39 737 aaKnown RBP13.4□□□□□ -0.26
SGCA-201ENST00000262018 PHACTR1Q9C0D0 580 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 NEU3Q9UQ49 428 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 PCDHGA8Q9Y5G5 932 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 SNX10Q9Y5X0 201 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 ANKRD17O75179 2603 aaKnown RBP13.4□□□□□ -0.26
SGCA-201ENST00000262018 BLACEA4D250 179 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 C5orf60A6NFR6 353 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 GOLGA8KD6RF30 607 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 PPP1R12AO14974 1030 aaPredicted RBP13.39□□□□□ -0.27
SGCA-201ENST00000262018 LATO43561 262 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 ACSL4O60488 711 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 GCATO75600 419 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 MOCS2O96007 188 aaPredicted RBP13.39□□□□□ -0.27
SGCA-201ENST00000262018 ALPPL2P10696 532 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 CD70P32970 193 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 EIF3BP55884 814 aaKnown RBP13.39□□□□□ -0.27
SGCA-201ENST00000262018 OVGP1Q12889 678 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 TERF2Q15554 542 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 HNRNPA1L2Q32P51 320 aaKnown RBP13.39□□□□□ -0.27
SGCA-201ENST00000262018 ARTNQ5T4W7 220 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 ACBD5Q5T8D3 534 aaPredicted RBP13.39□□□□□ -0.27
SGCA-201ENST00000262018 CCDC25Q86WR0 208 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 AADATQ8N5Z0 425 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 IFI44Q8TCB0 444 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 C1orf74Q96LT6 269 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 PSMG3-AS1Q96PY0 264 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 CDC42EP4Q9H3Q1 356 aaKnown RBP13.39□□□□□ -0.27
SGCA-201ENST00000262018 CA5BQ9Y2D0 317 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 ENTPD2Q9Y5L3 495 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 CLEC18AA5D8T8 446 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 RIPK2O43353 540 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 LZTS3O60299 673 aaPredicted RBP13.39□□□□□ -0.27
SGCA-201ENST00000262018 THEGLP0DJG4 465 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 VAV1P15498 845 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 EPHB2P29323 1055 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 SERPINB6P35237 376 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 MAGEA6P43360 314 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 CBLBQ13191 982 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 SRSF6Q13247 344 aaKnown RBP13.39□□□□□ -0.27
SGCA-201ENST00000262018 KCNJ11Q14654 390 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 IGFBP7Q16270 282 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 POM121L1PQ3SYA9 428 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 DENND2CQ68D51 928 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 CLEC18BQ6UXF7 455 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 CLEC14AQ86T13 490 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 CLEC18CQ8NCF0 446 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 WFDC5Q8TCV5 224 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 ARRDC3Q96B67 414 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 GRAMD1AQ96CP6 724 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 TBC1D31Q96DN5 1066 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 KLHDC7BQ96G42 594 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 MYO19Q96H55 970 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 PWWP2AQ96N64 755 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 BRD8Q9H0E9 1235 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 SIK2Q9H0K1 926 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 CAAP1Q9H8G2 361 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 EVA1BQ9NVM1 165 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 HS3ST4Q9Y661 456 aa13.39□□□□□ -0.27
SGCA-201ENST00000262018 NBASA2RRP1 2371 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 LY6G6EA0A0G2JKS1 128 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 EIF3HO15372 352 aaKnown RBP eCLIP13.38□□□□□ -0.27
SGCA-201ENST00000262018 FGF10O15520 208 aaPredicted RBP13.38□□□□□ -0.27
SGCA-201ENST00000262018 TTC4O95801 387 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 GIMD1P0DJR0 217 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 ZNF844Q08AG5 666 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 SLC29A2Q14542 456 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 FAM133BQ5BKY9 247 aaKnown RBP13.38□□□□□ -0.27
SGCA-201ENST00000262018 C9orf64Q5T6V5 341 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 ANKRD22Q5VYY1 191 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 NADSYN1Q6IA69 706 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.38□□□□□ -0.27
SGCA-201ENST00000262018 PTRH1Q86Y79 214 aaKnown RBP13.38□□□□□ -0.27
SGCA-201ENST00000262018 WDR36Q8NI36 951 aaKnown RBP13.38□□□□□ -0.27
SGCA-201ENST00000262018 LRRN4Q8WUT4 740 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 HTR3CQ8WXA8 447 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 ZBTB9Q96C00 473 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 RBM15Q96T37 977 aaKnown RBP eCLIP13.38□□□□□ -0.27
SGCA-201ENST00000262018 TMEM109Q9BVC6 243 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 KLC2Q9H0B6 622 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 SLC25A18Q9H1K4 315 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 CATSPERBQ9H7T0 1116 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 LRRC4CQ9HCJ2 640 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 NINJ2Q9NZG7 142 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 SRPK3Q9UPE1 567 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 DMTF1Q9Y222 760 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 U3KQA8 63 aa13.38□□□□□ -0.27
SGCA-201ENST00000262018 UTP20O75691 2785 aaKnown RBP13.37□□□□□ -0.27
SGCA-201ENST00000262018 TCRBV7S3A2A0A539 114 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 CPED1A4D0V7 1026 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 WASH4PA8MWX3 477 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 E7ESA3 106 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 ALOX15BO15296 676 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 PIAS2O75928 621 aa13.37□□□□□ -0.27
SGCA-201ENST00000262018 TMEM63AO94886 807 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms