RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 PFN3P60673 137 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 DPTQ07507 201 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 PDE1CQ14123 709 aaPredicted RBP18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 CYP1B1Q16678 543 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 ZNF423Q2M1K9 1284 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 UAP1L1Q3KQV9 507 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 ZDHHC20Q5W0Z9 365 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 PNCKQ6P2M8 343 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 CCDC137Q6PK04 289 aaKnown RBP18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 RANBP10Q6VN20 620 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 Q6ZVL8 140 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 LYSMD3Q7Z3D4 306 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 NLRP8Q86W28 1048 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 AP2M1Q96CW1 435 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 CAPZA3Q96KX2 299 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 RUNDC3BQ96NL0 473 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 MBNL1Q9NR56 388 aaKnown RBP18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 RAB6BQ9NRW1 208 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.73■□□□□ 0.596e-7■■■■□ 26.6
CYSTM1-201ENST00000261811 SHOC2Q9UQ13 582 aa18.73■□□□□ 0.59
CYSTM1-201ENST00000261811 GOLGA8CPA6NN73 597 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 H3BM21 787 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 CDX4O14627 284 aaPredicted RBP18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 GDF9O60383 454 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 CRTAMO95727 393 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 AP2A1O95782 977 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 ATXN1LP0C7T5 689 aaKnown RBP18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 PIRTP0C851 137 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 COILP38432 576 aaPredicted RBP18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 KCNJ1P48048 391 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 FNTAP49354 379 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 INAVAQ3KP66 663 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 RAET1GQ6H3X3 334 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 GLT6D1Q7Z4J2 308 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 TMC3Q7Z5M5 1100 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 TECPR1Q7Z6L1 1165 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 C17orf53Q8N3J3 647 aaPredicted RBP18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 PDCD7Q8N8D1 485 aaKnown RBP18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 BLOC1S5Q8TDH9 187 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 APOOQ9BUR5 198 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 FAM83DQ9H4H8 585 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 WDR26Q9H7D7 661 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 PHPT1Q9NRX4 125 aaPredicted RBP18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 TM7SF3Q9NS93 570 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 PKP3Q9Y446 797 aa18.72■□□□□ 0.59
CYSTM1-201ENST00000261811 ZNF106Q9H2Y7 1883 aaKnown RBP18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 SPTY2D1-AS1A0A0U1RR47 76 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 C2orf81A6NN90 581 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 KIF2AO00139 706 aaPredicted RBP18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 AP3B1O00203 1094 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 PPFIA2O75334 1257 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 SLC4A1P02730 911 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 HOXC4P09017 264 aaPredicted RBP18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 C1SP09871 688 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 TEAD1P28347 426 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 ADRA1AP35348 466 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 HMGCLP35914 325 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 GPR1P46091 355 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 SPINT3P49223 89 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 BLKP51451 505 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 BNC1Q01954 994 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 PTPRRQ15256 657 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 SYT10Q6XYQ8 523 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 PPP1R21Q6ZMI0 780 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 MACC1Q6ZN28 852 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 PARGQ86W56 976 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 KLHDC8BQ8IXV7 354 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 BTN2A2Q8WVV5 523 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 SMIM14Q96QK8 99 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 GORASP1Q9BQQ3 440 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 ETNK1Q9HBU6 452 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 ARNT2Q9HBZ2 717 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 RXFP3Q9NSD7 469 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 PCDHGB2Q9Y5G2 931 aa18.71■□□□□ 0.59
CYSTM1-201ENST00000261811 LRP4O75096 1905 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 MYLKQ15746 1914 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 A0A1B0GTQ1 180 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 CCDC188H7C350 402 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 GM2AP17900 193 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 RPL22P35268 128 aaKnown RBP18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 TRIM23P36406 574 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 CHRNA4P43681 627 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 HNRNPKP61978 463 aaKnown RBP eCLIP18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 BASP1P80723 227 aaKnown RBP18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 SARNPP82979 210 aaKnown RBP18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 SEMA5AQ13591 1074 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 LAMB3Q13751 1172 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 NFATC4Q14934 902 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 CDKN3Q16667 212 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 FAXCQ5TGI0 409 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 KCTD11Q693B1 232 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 SPATS2Q86XZ4 545 aaKnown RBP18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 TAB3Q8N5C8 712 aaPredicted RBP18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 DNAAF3Q8N9W5 541 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 BRSK1Q8TDC3 778 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 APOL2Q9BQE5 337 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 RTKNQ9BST9 563 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 ABCG8Q9H221 673 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 GPR27Q9NS67 375 aa18.7■□□□□ 0.58
CYSTM1-201ENST00000261811 CD84Q9UIB8 345 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms