RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 OR6Y1Q8NGX8 325 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 CYP2W1Q8TAV3 490 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 LRMDAQ9H2I8 198 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SERHL2Q9H4I8 314 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TFB2MQ9H5Q4 396 aaKnown RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SERHLQ9NQF3 203 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 FBXW11Q9UKB1 542 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 FBXO5Q9UKT4 447 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SCML2Q9UQR0 700 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 RP1L1Q8IWN7 2480 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 KLF11O14901 512 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 CCNT2O60583 730 aaKnown RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 USP2O75604 605 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 BCL10O95999 233 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ELFN1P0C7U0 828 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 UGT2B15P54855 530 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 INCA1Q0VD86 236 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 GRB14Q14449 540 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 POU6F1Q14863 301 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 MAPKAPK3Q16644 382 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ADGRD1Q6QNK2 874 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SERPINA13PQ6UXR4 307 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ANKLE1Q8NAG6 615 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ATXN7L3BQ96GX2 97 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 NECTIN4Q96NY8 510 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 BTBD9Q96Q07 612 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 MIPEPQ99797 713 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 HERC2P3Q9BVR0 1158 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ACE2Q9BYF1 805 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ZFYVE1Q9HBF4 777 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 STXBP5LQ9Y2K9 1186 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF451Q9Y4E5 1061 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PCDHGB7Q9Y5F8 929 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 RREB1Q92766 1687 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 BLACEA4D250 179 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SLC16A5O15375 505 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 IL6P05231 212 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 LCP2Q13094 533 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 DNAJC11Q9NVH1 559 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 CCDC162PA2VCL2 907 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 EFCAB10A6NFE3 127 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PI15O43692 258 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TLR5O60602 858 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 FYNP06241 537 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 GALNTL6Q49A17 601 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 LRRC70Q7Z2Q7 622 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 MTDHQ86UE4 582 aaKnown RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SELENOMQ8WWX9 145 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SMOC2Q9H3U7 446 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 DUXAA6NLW8 204 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 AKAP8O43823 692 aaKnown RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 HSD3B1P14060 373 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PKMP14618 531 aaKnown RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 VAV1P15498 845 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 IDSP22304 550 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 HSD3B2P26439 372 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ACADLP28330 430 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 CDKN2BP42772 138 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 CNTN2Q02246 1040 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TRIM16LQ309B1 348 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TCEAL5Q5H9L2 206 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 LRRC74BQ6ZQY2 392 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TTC29Q8NA56 475 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 HHIPL1Q96JK4 782 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SYNDIG1Q9H7V2 258 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 OSGEPQ9NPF4 335 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 MBD2Q9UBB5 411 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SUFUQ9UMX1 484 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 A0A087WWV3 80 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TBC1D3BA6NDS4 549 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 FAM86C2PA6NEL3 165 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 MATN2O00339 956 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ACSL4O60488 711 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 DDNO94850 711 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ADSSP30520 456 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 CD86P42081 329 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ANGPT1Q15389 498 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 NAIF1Q69YI7 327 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 BICRALQ6AI39 1079 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 IL27RAQ6UWB1 636 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 MSANTD1Q6ZTZ1 278 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 DEFB107AQ8IZN7 70 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 CERS5Q8N5B7 392 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 METTL2AQ96IZ6 378 aaKnown RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SPATA17Q96L03 361 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 RMDN2Q96LZ7 410 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 RDH12Q96NR8 316 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 BCO2Q9BYV7 579 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 GLIS2Q9BZE0 524 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ASB8Q9H765 288 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SCML1Q9UN30 329 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TDRKHQ9Y2W6 561 aaKnown RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PCDHGA11Q9Y5H2 935 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 LRIG2O94898 1065 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 RB1P06400 928 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ADRB2P07550 413 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PGS1Q32NB8 556 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 GET4Q7L5D6 327 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ADGRD2Q7Z7M1 963 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 MSANTD3Q96H12 275 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms