RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 HEY1Q9Y5J3 304 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 DNAH2Q9P225 4427 aa5.63□□□□□ -1.51
TOPBP1-201ENST00000260810 LRRD1A4D1F6 860 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 KRT86O43790 486 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 CLDN7O95471 211 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 PAFAH1B1P43034 410 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 WNT3P56703 355 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 PPP6R3Q5H9R7 873 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 ZNF438Q7Z4V0 828 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 TICAM1Q8IUC6 712 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 CEP112Q8N8E3 955 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 OR52B6Q8NGF0 335 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 SPPL2BQ8TCT7 592 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 ZNF592Q92610 1267 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 TBATAQ96M53 351 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 SERHL2Q9H4I8 314 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 GLOD4Q9HC38 313 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 PRSS16Q9NQE7 514 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 EIF2B3Q9NR50 452 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 AMFRQ9UKV5 643 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 CHMP2BQ9UQN3 213 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 RAD54BQ9Y620 910 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 ODC1P11926 461 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 GPS1Q13098 491 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 FASTKQ14296 549 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 DHCR24Q15392 516 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 MPP7Q5T2T1 576 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 OR6B2Q6IFH4 312 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 ZCCHC23Q6ZST2 131 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 MARK2Q7KZI7 788 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 KIAA1328Q86T90 577 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 SYNPOQ8N3V7 929 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 ATL2Q8NHH9 583 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 OR52B2Q96RD2 323 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 CLPBQ9H078 707 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 RABEP2Q9H5N1 569 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 LRFN2Q9ULH4 789 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 SNX11Q9Y5W9 270 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 CHADO15335 359 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 RNF40O75150 1001 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 SIX3O95343 332 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 MATN4O95460 622 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 NEFHP12036 1026 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 FDXRP22570 491 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 ADRM1Q16186 407 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 XKR7Q5GH72 579 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 TECRLQ5HYJ1 363 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 IZUMO3Q5VZ72 239 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 SEL1L3Q68CR1 1132 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 DNAJC24Q6P3W2 148 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 Q6ZVU0 165 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 LRRC6Q86X45 466 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 MAIP1Q8WWC4 291 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 MAGOHBQ96A72 148 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 CCDC77Q9BR77 488 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 DHX35Q9H5Z1 703 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 AKIRIN1Q9H9L7 192 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 KCNK12Q9HB15 430 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 ZFYVE1Q9HBF4 777 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 ABCC13Q9NSE7 274 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 ZNF490Q9ULM2 529 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 GTF3C1Q12789 2109 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 A0A1W2PR77 199 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 OR6C75A6NL08 312 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 GOLGA8CPA6NN73 597 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 PRPF4O43172 522 aaKnown RBP eCLIP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 CNOT3O75175 753 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 ACSL3O95573 720 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 MAGEA4P43358 317 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 SULT1E1P49888 294 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 KRT83P78385 493 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 MAP7D1Q3KQU3 841 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 LYSMD3Q7Z3D4 306 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 CACNA2D4Q7Z3S7 1137 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 BTN2A3PQ96KV6 586 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 NAP1L3Q99457 506 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 TIMP4Q99727 224 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 ADPGKQ9BRR6 497 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 ABCG4Q9H172 646 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 NKX1-2Q9UD57 310 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 SLC6A14Q9UN76 642 aa5.62□□□□□ -1.51
TOPBP1-201ENST00000260810 CHUKO15111 745 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 BCAS1O75363 584 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 MTX2O75431 263 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 FGBP02675 491 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 HMBSP08397 361 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 PTPN2P17706 415 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 CHRNA3P32297 505 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 ACSL1P33121 698 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 GNA12Q03113 381 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 GRM2Q14416 872 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 C6orf163Q5TEZ5 329 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 PACS1Q6VY07 963 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 CEP57Q86XR8 500 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 C10orf67Q8IYJ2 551 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 TFB1MQ8WVM0 346 aaKnown RBP5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 EXOC4Q96A65 974 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 FCRL1Q96LA6 429 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 SPG21Q9NZD8 308 aa5.61□□□□□ -1.51
TOPBP1-201ENST00000260810 USH1CQ9Y6N9 552 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms