RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 CHPFQ8IZ52 775 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 AHI1Q8N157 1196 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 DCLK2Q8N568 766 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 C2CD4AQ8NCU7 369 aaPredicted RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 MDGA1Q8NFP4 955 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 OR2AP1Q8NGE2 309 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 OR13C4Q8NGS5 318 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 PDCD6IPQ8WUM4 868 aaKnown RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 CKAP2Q8WWK9 683 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 PEX13Q92968 403 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ISL2Q96A47 359 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ISG20Q96AZ6 181 aaKnown RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ATXN7L3BQ96GX2 97 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 DNAJC1Q96KC8 554 aaKnown RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ZNF317Q96PQ6 595 aaPredicted RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 FAM167BQ9BTA0 163 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ADGRE3Q9BY15 652 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 CIPCQ9C0C6 399 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 PCMTD2Q9NV79 361 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 POLR3BQ9NW08 1133 aaPredicted RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 RIMKLBQ9ULI2 386 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 MTO1Q9Y2Z2 717 aaKnown RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 R4GN57 208 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 GMNCA6NCL1 334 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ANTXRLA6NF34 631 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ANKRD66B4E2M5 251 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 TRAFD1O14545 582 aaPredicted RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 SLC7A4O43246 635 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 TDGF1P13385 188 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 NTSR1P30989 418 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 PLA2G5P39877 138 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 NBL1P41271 181 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 MAGEA12P43365 314 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 DGKEP52429 567 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 MPP1Q00013 466 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ECT2LQ008S8 904 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 SULT2A1Q06520 285 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 CTBP1Q13363 440 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 LAMB3Q13751 1172 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 THOC5Q13769 683 aaKnown RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 EIF4HQ15056 248 aaKnown RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 MBLAC2Q68D91 279 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ZNF470Q6ECI4 717 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 NEPROQ6NW34 567 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ZC3HC1Q86WB0 502 aaKnown RBP17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ACVR1CQ8NER5 493 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 TSTD1Q8NFU3 115 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 WFIKKN2Q8TEU8 576 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 DYDC1Q8WWB3 177 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 NELL1Q92832 810 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 HDAC10Q969S8 669 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 MYO19Q96H55 970 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 VPS39Q96JC1 886 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ZDHHC4Q9NPG8 344 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 ELOVL2Q9NXB9 296 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 PCDHB9Q9Y5E1 797 aa17.47■□□□□ 0.39
SRSF1-201ENST00000258962 MUC22E2RYF6 1773 aaPredicted RBP17.46■□□□□ 0.39
SRSF1-201ENST00000258962 ZNF106Q9H2Y7 1883 aaKnown RBP17.46■□□□□ 0.39
SRSF1-201ENST00000258962 WDFY4Q6ZS81 3184 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.46■□□□□ 0.39
SRSF1-201ENST00000258962 COPEO14579 308 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 TM9SF1O15321 606 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 HTRA2O43464 458 aaPredicted RBP17.46■□□□□ 0.39
SRSF1-201ENST00000258962 PGLSO95336 258 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 APBB3O95704 486 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 GSRP00390 522 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 AHSGP02765 367 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 PSMA3P25788 255 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 ETV4P43268 484 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 MAPK8P45983 427 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 FNTBP49356 437 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 CRY1Q16526 586 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 EGFLAMQ63HQ2 1017 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 LVRNQ6Q4G3 990 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 GLT6D1Q7Z4J2 308 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 LONP2Q86WA8 852 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 ACMSDQ8TDX5 336 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 STYXQ8WUJ0 223 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 PIH1D2Q8WWB5 315 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 PTPRN2Q92932 1015 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 MRGPRX3Q96LB0 322 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 TBATAQ96M53 351 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 HHIPQ96QV1 700 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 SRPK1Q96SB4 655 aaKnown RBP17.46■□□□□ 0.39
SRSF1-201ENST00000258962 CEP44Q9C0F1 390 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 RHOJQ9H4E5 214 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 POLMQ9NP87 494 aaPredicted RBP17.46■□□□□ 0.39
SRSF1-201ENST00000258962 SLCO3A1Q9UIG8 710 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 ERVW-1Q9UQF0 538 aa17.46■□□□□ 0.39
SRSF1-201ENST00000258962 OR51F1A6NGY5 319 aa17.45■□□□□ 0.38
SRSF1-201ENST00000258962 NPC1O15118 1278 aa17.45■□□□□ 0.38
SRSF1-201ENST00000258962 RPP40O75818 363 aaKnown RBP17.45■□□□□ 0.38
SRSF1-201ENST00000258962 CRTAMO95727 393 aa17.45■□□□□ 0.38
SRSF1-201ENST00000258962 TOP3BO95985 862 aaKnown RBP17.45■□□□□ 0.38
SRSF1-201ENST00000258962 DHRS4L1P0CG22 281 aa17.45■□□□□ 0.38
SRSF1-201ENST00000258962 HNRNPLP14866 589 aaKnown RBP eCLIP17.45■□□□□ 0.38
SRSF1-201ENST00000258962 FOXN2P32314 431 aa17.45■□□□□ 0.38
SRSF1-201ENST00000258962 GRIA4P48058 902 aa17.45■□□□□ 0.38
SRSF1-201ENST00000258962 PXNP49023 591 aaPredicted RBP17.45■□□□□ 0.38
SRSF1-201ENST00000258962 SNRPD1P62314 119 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms