RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 TOR2AQ5JU69 321 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 TMEM240Q5SV17 173 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 C9orf50Q5SZB4 431 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 GRTP1Q5TC63 336 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 EFCAB12Q6NXP0 572 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 LLGL2Q6P1M3 1020 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 PRSS48Q7RTY5 328 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 ZNF438Q7Z4V0 828 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 LYSMD2Q8IV50 215 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 KIAA0319LQ8IZA0 1049 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 TDHQ8IZJ6 230 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 IL17RDQ8NFM7 739 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 TFB1MQ8WVM0 346 aaKnown RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 SLC7A3Q8WY07 619 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 CITED4Q96RK1 184 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 APOL5Q9BWW9 433 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 BTBD2Q9BX70 525 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 SLC6A15Q9H2J7 730 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 BRD9Q9H8M2 597 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 RC3H2Q9HBD1 1191 aaKnown RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 NECTIN3Q9NQS3 549 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 PAK1IP1Q9NWT1 392 aaPredicted RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 ADPRHL2Q9NX46 363 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 PAQR5Q9NXK6 330 aaPredicted RBP11.85□□□□□ -0.51
CCNA1-201ENST00000255465 GLTPQ9NZD2 209 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 SLC27A5Q9Y2P5 690 aa11.85□□□□□ -0.51
CCNA1-201ENST00000255465 GBF1Q92538 1859 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 PTPRSQ13332 1948 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 PCP4L1A6NKN8 68 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 LEUTXA8MZ59 168 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 E5RJQ4 531 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 NBNO60934 754 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 KCNK2O95069 426 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 VNN1O95497 513 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 APOA1P02647 267 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 PFKMP08237 780 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 SLC2A3P11169 496 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 ZNF3P17036 446 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 ERP29P30040 261 aaKnown RBP11.84□□□□□ -0.51
CCNA1-201ENST00000255465 SERPINB5P36952 375 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 PSMD8P48556 350 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 ALDH7A1P49419 539 aaKnown RBP11.84□□□□□ -0.51
CCNA1-201ENST00000255465 MGAT3Q09327 533 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 PTP4A2Q12974 167 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 CCNYL2Q5T2Q4 361 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 STXBP5Q5T5C0 1151 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 BROXQ5VW32 411 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 RINT1Q6NUQ1 792 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 PSRC1Q6PGN9 363 aaPredicted RBP11.84□□□□□ -0.51
CCNA1-201ENST00000255465 SH2D5Q6ZV89 423 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 CREB3L2Q70SY1 520 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 LINC00523Q86TU6 105 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 RETREG3Q86VR2 466 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 PGAM4Q8N0Y7 254 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 SFRP1Q8N474 314 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 LRRC71Q8N4P6 559 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 LINC01465Q8N7H1 131 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 DCAKDQ8WVC6 231 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 SEPT8Q92599 483 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 HEMGNQ9BXL5 484 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 NAA50Q9GZZ1 169 aaKnown RBP11.84□□□□□ -0.51
CCNA1-201ENST00000255465 IL37Q9NZH6 218 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 TRMT6Q9UJA5 497 aaKnown RBP11.84□□□□□ -0.51
CCNA1-201ENST00000255465 TLR6Q9Y2C9 796 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 CDY2AQ9Y6F7 541 aa11.84□□□□□ -0.51
CCNA1-201ENST00000255465 A0A0G2JMP0 313 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 A0A1W2PPC1 479 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 ZNF98A6NK75 572 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 PP2D1A8MPX8 630 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 SLC16A3O15427 465 aaKnown RBP11.83□□□□□ -0.52
CCNA1-201ENST00000255465 GATCO43716 136 aaKnown RBP11.83□□□□□ -0.52
CCNA1-201ENST00000255465 DFNA5O60443 496 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 PTP4A3O75365 173 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 SNX4O95219 450 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 FGBP02675 491 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 CXCL10P02778 98 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 TCN1P20061 433 aaPredicted RBP11.83□□□□□ -0.52
CCNA1-201ENST00000255465 MATN1P21941 496 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 GLDCP23378 1020 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 KLRC2P26717 231 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 LRPAP1P30533 357 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 HNF1BP35680 557 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 CLCN3P51790 818 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 ERVK-21P61565 698 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 MRPS6P82932 125 aaKnown RBP11.83□□□□□ -0.52
CCNA1-201ENST00000255465 RIN1Q13671 783 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 SLC36A3Q495N2 470 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 XKR9Q5GH70 373 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 WDR44Q5JSH3 913 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 IER5Q5VY09 327 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 AADACL2Q6P093 401 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 DENND5BQ6ZUT9 1274 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 BTLAQ7Z6A9 289 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 KSR1Q8IVT5 923 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 ARHGEF19Q8IW93 802 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 UBQLNLQ8IYU4 475 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 DEPDC4Q8N2C3 294 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 KYQ8NBH2 561 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 LEMD2Q8NC56 503 aa11.83□□□□□ -0.52
CCNA1-201ENST00000255465 C7orf57Q8NEG2 295 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms