RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 SRCP12931 536 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 GKP32189 559 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 CLNS1AP54105 237 aaKnown RBP16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 INSCQ1MX18 579 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 CERCAMQ5T4B2 595 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 DCLK2Q8N568 766 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 TEX26Q8N6G2 289 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 NSMCE3Q96MG7 304 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 P2RY13Q9BPV8 354 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 APOL2Q9BQE5 337 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 GBA3Q9H227 469 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 DCLRE1BQ9H816 532 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 GLOD4Q9HC38 313 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 SNX15Q9NRS6 342 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 SEPT3Q9UH03 358 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 SLC25A13Q9UJS0 675 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 TRHDEQ9UKU6 1024 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 ERVW-1Q9UQF0 538 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 TTC34A8MYJ7 566 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 CD86P42081 329 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 RHOAP61586 193 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 RCN2Q14257 317 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 DLG2Q15700 870 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 PCSK7Q16549 785 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 PTPRNQ16849 979 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 ANKRD20A4Q4UJ75 823 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 ACSBG2Q5FVE4 666 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 STRA8Q7Z7C7 330 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 KIRREL3Q8IZU9 778 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 ZNF557Q8N988 423 aaPredicted RBP16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 PIWIL2Q8TC59 973 aaKnown RBP16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 WDR60Q8WVS4 1066 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 ATXN7L3BQ96GX2 97 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 ZNF599Q96NL3 588 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 VAT1Q99536 393 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 SEMA3CQ99985 751 aa16.99■□□□□ 0.31
CDKN1A-201ENST00000244741 PMPCBO75439 489 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 ZNF821O75541 412 aaPredicted RBP16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 LMNAP02545 664 aaKnown RBP16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 SERPINE1P05121 402 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 HLA-EP13747 358 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 ARRB2P32121 409 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 PGM1P36871 562 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 TUBB3Q13509 450 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 UBAP2LQ14157 1087 aaKnown RBP16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 RYBPQ8N488 228 aaPredicted RBP16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 RBM15BQ8NDT2 890 aaKnown RBP16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 EZH1Q92800 747 aaPredicted RBP16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 MFSD3Q96ES6 412 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 MRGPRX3Q96LB0 322 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 PSKH2Q96QS6 385 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 ACOX2Q99424 681 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 RBBP8Q99708 897 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 MMADHCQ9H3L0 296 aaPredicted RBP16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 LHX3Q9UBR4 397 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 TAGLN3Q9UI15 199 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 LRRC42Q9Y546 428 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 PRR5-ARHGAP8B1AHC4 643 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 INSIG1O15503 277 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 ATP9BO43861 1147 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 USP1O94782 785 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 SERPINA6P08185 405 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 TPH1P17752 444 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 WASP42768 502 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 MAGEA12P43365 314 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 ABCG1P45844 678 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 PTDSS1P48651 473 aaKnown RBP16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 ARHGAP8P85298 464 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 TAF11Q15544 211 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 HSP90AA5PQ58FG0 334 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 FSTL4Q6MZW2 842 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 Q6ZVU0 165 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 TMPRSS6Q8IU80 811 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 WDR75Q8IWA0 830 aaKnown RBP16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 PLD6Q8N2A8 252 aaKnown RBP16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 SORT1Q99523 831 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 PNPOQ9NVS9 261 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 COPG2Q9UBF2 871 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 HCN2Q9UL51 889 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 CA14Q9ULX7 337 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 PLA2G4CQ9UP65 541 aa16.98■□□□□ 0.31
CDKN1A-201ENST00000244741 ZNF189O75820 626 aaPredicted RBP16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 APODP05090 189 aa16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 ATP5BP06576 529 aaKnown RBP16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 SPRP35270 261 aaPredicted RBP16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 DMC1Q14565 340 aa16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 INO80DQ53TQ3 878 aaPredicted RBP16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 ITPRIPL1Q6GPH6 555 aa16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 MAVSQ7Z434 540 aa16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 IPMKQ8NFU5 416 aa16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 ARRDC2Q8TBH0 407 aa16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 FATE1Q969F0 183 aa16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 ISL2Q96A47 359 aa16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 MYO19Q96H55 970 aa16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 POLR1EQ9GZS1 481 aaKnown RBP16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 CHRAC1Q9NRG0 131 aa16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 HS3ST2Q9Y278 367 aa16.97■□□□□ 0.31
CDKN1A-201ENST00000244741 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms