RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 PTPN2P17706 415 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 UBAP2LQ14157 1087 aaKnown RBP23.24■■□□□ 1.31
MSX2-201ENST00000239243 PLEKHG6Q3KR16 790 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 ARHGAP15Q53QZ3 475 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 VWA5B1Q5TIE3 1220 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 TMEM207Q6UWW9 146 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 SH3RF2Q8TEC5 729 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 CADM1Q9BY67 442 aaKnown RBP23.24■■□□□ 1.31
MSX2-201ENST00000239243 MMADHCQ9H3L0 296 aaPredicted RBP23.24■■□□□ 1.31
MSX2-201ENST00000239243 EML4Q9HC35 981 aaKnown RBP23.24■■□□□ 1.31
MSX2-201ENST00000239243 TAS2R13Q9NYV9 303 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 PKP3Q9Y446 797 aa23.24■■□□□ 1.31
MSX2-201ENST00000239243 BPTFQ12830 3046 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 SOBPA7XYQ1 873 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 A8MT66 165 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 GSC2O15499 205 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 SOCS5O75159 536 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 MC4RP32245 332 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 BCL2L1Q07817 233 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 RINLQ6ZS11 566 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 PIM3Q86V86 326 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 LSMEM2Q8N112 164 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 POF1BQ8WVV4 589 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 C19orf43Q9BQ61 176 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 TM6SF2Q9BZW4 377 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 TCF7L2Q9NQB0 619 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 PLK2Q9NYY3 685 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 ZNF711Q9Y462 761 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 IGSF6O95976 241 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 ISCA2Q86U28 154 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 CMTM8Q8IZV2 173 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 AFAP1L2Q8N4X5 818 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 LEMD2Q8NC56 503 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 FAM13CQ8NE31 585 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 SHKBP1Q8TBC3 707 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 AGR3Q8TD06 166 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 FKBPLQ9UIM3 349 aa23.23■■□□□ 1.31
MSX2-201ENST00000239243 B2RBV5 119 aa23.22■■□□□ 1.31
MSX2-201ENST00000239243 K7ERQ8 282 aa23.22■■□□□ 1.31
MSX2-201ENST00000239243 SRP72O76094 671 aaKnown RBP23.22■■□□□ 1.31
MSX2-201ENST00000239243 RHOBTB1O94844 696 aa23.22■■□□□ 1.31
MSX2-201ENST00000239243 CD1DP15813 335 aa23.22■■□□□ 1.31
MSX2-201ENST00000239243 GALNT1Q10472 559 aaPredicted RBP23.22■■□□□ 1.31
MSX2-201ENST00000239243 ZNF557Q8N988 423 aaPredicted RBP23.22■■□□□ 1.31
MSX2-201ENST00000239243 HERVK_113Q902F9 699 aa23.22■■□□□ 1.31
MSX2-201ENST00000239243 GPR63Q9BZJ6 419 aa23.22■■□□□ 1.31
MSX2-201ENST00000239243 C1orf21Q9H246 121 aa23.22■■□□□ 1.31
MSX2-201ENST00000239243 ALG9Q9H6U8 611 aa23.22■■□□□ 1.31
MSX2-201ENST00000239243 ZDHHC2Q9UIJ5 367 aa23.22■■□□□ 1.31
MSX2-201ENST00000239243 A8MUI8 341 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 SMIM24O75264 130 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 PYGLP06737 847 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 NCF2P19878 526 aaPredicted RBP23.21■■□□□ 1.31
MSX2-201ENST00000239243 HOXA9P31269 272 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 HMGCLP35914 325 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 CCR2P41597 374 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 NFKB2Q00653 900 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 KDSRQ06136 332 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 DNAL1Q4LDG9 190 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 SLC9B1Q4ZJI4 515 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 WASHC2DQ5SRD0 308 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 ACAD11Q709F0 780 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 RHEBL1Q8TAI7 183 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 SPPL3Q8TCT6 385 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 FAR2Q96K12 515 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 TRMOQ9BU70 441 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 ATP13A3Q9H7F0 1226 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 COMMD10Q9Y6G5 202 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 LCHNA4D1U4 455 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 CD70P32970 193 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 TIAL1Q01085 375 aaKnown RBP eCLIP23.21■■□□□ 1.31
MSX2-201ENST00000239243 SMIM14Q96QK8 99 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 HCFC1R1Q9NWW0 138 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 IL17CQ9P0M4 197 aa23.21■■□□□ 1.31
MSX2-201ENST00000239243 SMAD6O43541 496 aaKnown RBP23.2■■□□□ 1.3
MSX2-201ENST00000239243 CD9P21926 228 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 CCND1P24385 295 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 LBX1P52954 281 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 STK40Q8N2I9 435 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 MAPK15Q8TD08 544 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 MICAL1Q8TDZ2 1067 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 PIH1D2Q8WWB5 315 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.2■■□□□ 1.3
MSX2-201ENST00000239243 CMTM5Q96DZ9 223 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 MOCOSQ96EN8 888 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 SMG9Q9H0W8 520 aaKnown RBP23.2■■□□□ 1.3
MSX2-201ENST00000239243 TFB2MQ9H5Q4 396 aaKnown RBP23.2■■□□□ 1.3
MSX2-201ENST00000239243 MAN1C1Q9NR34 630 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 EVLQ9UI08 416 aaPredicted RBP23.2■■□□□ 1.3
MSX2-201ENST00000239243 CLEC4EQ9ULY5 219 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 NEMP2A6NFY4 417 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 TRPC5OSA6NMA1 111 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 NRG2O14511 850 aaPredicted RBP23.2■■□□□ 1.3
MSX2-201ENST00000239243 HTRA2O43464 458 aaPredicted RBP23.2■■□□□ 1.3
MSX2-201ENST00000239243 PRSS56P0CW18 603 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 TPBGLP0DKB5 382 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 IMPDH1P20839 514 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 FMO4P31512 558 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 CCR10P46092 362 aa23.2■■□□□ 1.3
MSX2-201ENST00000239243 ZRANB3Q5FWF4 1079 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms