RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 UBXN8O00124 270 aa17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 RNASEH1O60930 286 aaKnown RBP17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 AIF1P55008 147 aa17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 INTS6LQ5JSJ4 861 aaKnown RBP17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 ZNF618Q5T7W0 954 aa17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 PAOXQ6QHF9 649 aa17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 MAGEC3Q8TD91 643 aa17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 COL26A1Q96A83 441 aa17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 APOLD1Q96LR9 279 aa17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 PLEKHG4BQ96PX9 1271 aa17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 PCDHAC1Q9H158 963 aa17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 SSU72Q9NP77 194 aaKnown RBP17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 PNPLA3Q9NST1 481 aa17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 SNX6Q9UNH7 406 aa17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 SAMHD1Q9Y3Z3 626 aaKnown RBP17.13■□□□□ 0.33
SLC1A4-201ENST00000234256 NFKBIEO00221 500 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 RFXANKO14593 260 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 MFN2O95140 757 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 SEMG2Q02383 582 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 ZNF605Q86T29 641 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 TERB1Q8NA31 727 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 OR2T12Q8NG77 320 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 TWIST2Q8WVJ9 160 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 TADA1Q96BN2 335 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 REXO5Q96IC2 774 aaKnown RBP17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 NMUR1Q9HB89 426 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 TXNRD2Q9NNW7 524 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 GNPTGQ9UJJ9 305 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 TCEA3O75764 348 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 ALDH1A2O94788 518 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 ITPKAP23677 461 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 ANXA11P50995 505 aaKnown RBP17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 AQP4P55087 323 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 ITGA7Q13683 1181 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 OFCC1Q8IZS5 231 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 KRT78Q8N1N4 520 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 CBR4Q8N4T8 237 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 SVOPQ8N4V2 548 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 FTHL17Q9BXU8 183 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 SLC39A8Q9C0K1 460 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 EVLQ9UI08 416 aaPredicted RBP17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 CAB39Q9Y376 341 aaPredicted RBP17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 COMMD3-BMI1R4GMX3 469 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 MYH8P13535 1937 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 ARL5CA6NH57 179 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 H3BMM5 538 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 ADCY6O43306 1168 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 SLC9B1Q4ZJI4 515 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 XKR6Q5GH73 641 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 RSBN1Q5VWQ0 802 aaPredicted RBP17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 GLYATQ6IB77 296 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 IGDCC3Q8IVU1 814 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 CPSF7Q8N684 471 aaKnown RBP17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 NIPA2Q8N8Q9 360 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 WDR60Q8WVS4 1066 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 DGCR14Q96DF8 476 aaKnown RBP17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 HMCESQ96FZ2 354 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 PIWIL1Q96J94 861 aaKnown RBP17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 EBF3Q9H4W6 596 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 CLK4Q9HAZ1 481 aaKnown RBP17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 STK39Q9UEW8 545 aa17.12■□□□□ 0.33
SLC1A4-201ENST00000234256 DUOX1Q9NRD9 1551 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 CCDC189A1A4V9 331 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 KRT87PA6NCN2 255 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 MED26O95402 600 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 NDST3O95803 873 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 ASGR1P07306 291 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 DBTP11182 482 aaKnown RBP17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 COL6A2P12110 1019 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 EPORP19235 508 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 POLR2EP19388 210 aaKnown RBP17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 ANGPT1Q15389 498 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 TIGD5Q53EQ6 642 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 ZYG11AQ6WRX3 759 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 MTSS1LQ765P7 747 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 NAT16Q8N8M0 369 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 FZD10Q9ULW2 581 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 MFHAS1Q9Y4C4 1052 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 TBC1D3BA6NDS4 549 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 SIM2Q14190 667 aaPredicted RBP17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 TSNQ15631 228 aaKnown RBP17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 TRIP4Q15650 581 aaPredicted RBP17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 INAQ16352 499 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 PHKG1Q16816 387 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 SPANXN2Q5MJ10 180 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 PGAM4Q8N0Y7 254 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 ZNF540Q8NDQ6 660 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 ZCCHC2Q9C0B9 1178 aaKnown RBP17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 NUAK2Q9H093 628 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 MRPL17Q9NRX2 175 aaKnown RBP17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 SIX4Q9UIU6 781 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 FBXW11Q9UKB1 542 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 KLHL20Q9Y2M5 609 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 RAI2Q9Y5P3 530 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 PIGRP01833 764 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 RPL17P18621 184 aaKnown RBP17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 CCNCP24863 283 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 BNIP2Q12982 314 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 ARMCX4Q5H9R4 360 aa17.11■□□□□ 0.33
SLC1A4-201ENST00000234256 PPM1LQ5SGD2 360 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms