RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 NOL4O94818 638 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 FSHRP23945 695 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 PTPN9P43378 593 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 PTGES3LE9PB15 166 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 CDH3P22223 829 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 ASPAP45381 313 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 ZCWPW2Q504Y3 356 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 INTS11Q5TA45 600 aaKnown RBP18.44■□□□□ 0.54
CLIP2-201ENST00000223398 ISLR2Q6UXK2 745 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 NELL1Q92832 810 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 ACSS3Q9H6R3 686 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 CYLDQ9NQC7 956 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 KCTD5Q9NXV2 234 aa18.44■□□□□ 0.54
CLIP2-201ENST00000223398 MRPS22P82650 360 aaKnown RBP18.43■□□□□ 0.54
CLIP2-201ENST00000223398 GRB14Q14449 540 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 LIPMQ5VYY2 423 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 ZDHHC20Q5W0Z9 365 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 CHSY3Q70JA7 882 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 BHLHE22Q8NFJ8 381 aaPredicted RBP18.43■□□□□ 0.54
CLIP2-201ENST00000223398 GPR21Q99679 349 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 MAGEH1Q9H213 219 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 TBC1D23Q9NUY8 699 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 YIPF1Q9Y548 306 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 TCRBV7S2A1N4TA0A589 114 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 PRKCGP05129 697 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 ANXA6P08133 673 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 CORO7P57737 925 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 NUP107P57740 925 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 MTAPQ13126 283 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 KIAA2013Q8IYS2 634 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 ZNF296Q8WUU4 475 aaPredicted RBP18.43■□□□□ 0.54
CLIP2-201ENST00000223398 RNFT2Q96EX2 444 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 SLC25A12O75746 678 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 CCNCP24863 283 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 RPL4P36578 427 aaKnown RBP18.43■□□□□ 0.54
CLIP2-201ENST00000223398 NRIP1P48552 1158 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 SLC25A3Q00325 362 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 PURAQ00577 322 aaKnown RBP18.43■□□□□ 0.54
CLIP2-201ENST00000223398 DLG2Q15700 870 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 RNASEH2BQ5TBB1 312 aaKnown RBP18.43■□□□□ 0.54
CLIP2-201ENST00000223398 GPR180Q86V85 440 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 CD101Q93033 1021 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 GRIP2Q9C0E4 1043 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 POLR1BQ9H9Y6 1135 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 MRPS33Q9Y291 106 aaKnown RBP18.43■□□□□ 0.54
CLIP2-201ENST00000223398 SLC45A1Q9Y2W3 748 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 CFIP05156 583 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 PIK3R1P27986 724 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 ITPKBP27987 946 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 BUD31P41223 144 aaPredicted RBP18.43■□□□□ 0.54
CLIP2-201ENST00000223398 CSKP41240 450 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 CACNG1Q06432 222 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 NAE1Q13564 534 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 TTMPQ5BVD1 217 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 CYP2S1Q96SQ9 504 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 RCOR3Q9P2K3 495 aaPredicted RBP18.43■□□□□ 0.54
CLIP2-201ENST00000223398 VPS4AQ9UN37 437 aa18.43■□□□□ 0.54
CLIP2-201ENST00000223398 CLOCKO15516 846 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 SNRPB2P08579 225 aaKnown RBP18.42■□□□□ 0.54
CLIP2-201ENST00000223398 HNRNPH1P31943 449 aaKnown RBP18.42■□□□□ 0.54
CLIP2-201ENST00000223398 RPS24P62847 133 aaKnown RBP18.42■□□□□ 0.54
CLIP2-201ENST00000223398 TXNDC8Q6A555 127 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 BHLHB9Q6PI77 547 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 DCBLD1Q8N8Z6 715 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 GBA3Q9H227 469 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 HNRNPH3P31942 346 aaKnown RBP18.42■□□□□ 0.54
CLIP2-201ENST00000223398 SH3PXD2AQ5TCZ1 1133 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 PIWIL4Q7Z3Z4 852 aaKnown RBP18.42■□□□□ 0.54
CLIP2-201ENST00000223398 RTL3Q8N8U3 475 aaKnown RBP18.42■□□□□ 0.54
CLIP2-201ENST00000223398 CREBZFQ9NS37 354 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 CCNDBP1O95273 360 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 L1CAMP32004 1257 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 GATMP50440 423 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 MPP1Q00013 466 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 SQLEQ14534 574 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 ZDHHC13Q8IUH4 622 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 PRSS58Q8IYP2 241 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 ZNF366Q8N895 744 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 C2orf15Q8WU43 125 aaKnown RBP18.42■□□□□ 0.54
CLIP2-201ENST00000223398 PPCDCQ96CD2 204 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 ACTL7BQ9Y614 415 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 ABHD14A-ACY1A0A1B0GW23 586 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 MAGEA13PA6NCF6 341 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 PPEF2O14830 753 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 IDH2P48735 452 aaKnown RBP18.42■□□□□ 0.54
CLIP2-201ENST00000223398 NRG1Q02297 640 aaPredicted RBP18.42■□□□□ 0.54
CLIP2-201ENST00000223398 MINDY4Q4G0A6 757 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 IRGCQ6NXR0 463 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 POMZP3Q6PJE2 187 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 ZNF567Q8N184 647 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 OR4A15Q8NGL6 344 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 SEZ6LQ9BYH1 1024 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 INTS7Q9NVH2 962 aaKnown RBP18.42■□□□□ 0.54
CLIP2-201ENST00000223398 ANGPT4Q9Y264 503 aa18.42■□□□□ 0.54
CLIP2-201ENST00000223398 REXO2Q9Y3B8 237 aaKnown RBP18.42■□□□□ 0.54
CLIP2-201ENST00000223398 STX4Q12846 297 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 TRIM32Q13049 653 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 UBAP2LQ14157 1087 aaKnown RBP18.41■□□□□ 0.54
CLIP2-201ENST00000223398 AIF1LQ9BQI0 150 aa18.41■□□□□ 0.54
CLIP2-201ENST00000223398 BRINP2Q9C0B6 783 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms