RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 TSACCQ96A04 125 aaPredicted RBP12.67□□□□□ -0.38
LSM5-201ENST00000223084 FUBP1Q96AE4 644 aaKnown RBP12.67□□□□□ -0.38
LSM5-201ENST00000223084 MRGPRX2Q96LB1 330 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 LYSMD1Q96S90 227 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 TMEM121Q9BTD3 319 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 LGR4Q9BXB1 951 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 ABCG8Q9H221 673 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 GBA3Q9H227 469 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 DNPEPQ9ULA0 475 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 SHOC2Q9UQ13 582 aa12.67□□□□□ -0.38
LSM5-201ENST00000223084 TOR1BO14657 336 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 ENC1O14682 589 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 ATXN1LP0C7T5 689 aaKnown RBP12.66□□□□□ -0.38
LSM5-201ENST00000223084 NME1P15531 152 aaKnown RBP12.66□□□□□ -0.38
LSM5-201ENST00000223084 ZNF30P17039 623 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 CXCR5P32302 372 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 GDF10P55107 478 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 OLIG2Q13516 323 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 C1orf61Q13536 156 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 TCEA2Q15560 299 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 ALG11Q2TAA5 492 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 FAXCQ5TGI0 409 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 RAET1GQ6H3X3 334 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 MACC1Q6ZN28 852 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 LYSMD3Q7Z3D4 306 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 RD3Q7Z3Z2 195 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 PHACTR4Q8IZ21 702 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 LMX1AQ8TE12 382 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 C1orf54Q8WWF1 131 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 EID2BQ96D98 161 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 SPATA13Q96N96 652 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 AGAP2Q99490 1192 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 FERMT1Q9BQL6 677 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 CARD9Q9H257 536 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 SPO11Q9Y5K1 396 aa12.66□□□□□ -0.38
LSM5-201ENST00000223084 LOC285095A0A1B0GVY8 99 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 TMEM202A6NGA9 273 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 USP27XA6NNY8 438 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 CACNB4O00305 520 aaPredicted RBP12.65□□□□□ -0.38
LSM5-201ENST00000223084 TRIM38O00635 465 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 AURKAO14965 403 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 LIASO43766 372 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 STK10O94804 968 aaKnown RBP12.65□□□□□ -0.38
LSM5-201ENST00000223084 SOD1P00441 154 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 AGTP01019 485 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 HTR1BP28222 390 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 TRIM23P36406 574 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 GEMP55040 296 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 SRP54P61011 504 aaKnown RBP12.65□□□□□ -0.38
LSM5-201ENST00000223084 HNRNPKP61978 463 aaKnown RBP eCLIP12.65□□□□□ -0.38
LSM5-201ENST00000223084 PPARDQ03181 441 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 MPP3Q13368 585 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 SNX1Q13596 522 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 SIX1Q15475 284 aaPredicted RBP12.65□□□□□ -0.38
LSM5-201ENST00000223084 INAVAQ3KP66 663 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 PRRT3Q5FWE3 981 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 SIRPB2Q5JXA9 342 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 ZNF569Q5MCW4 686 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 ITPRIPL1Q6GPH6 555 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 CCDC70Q6NSX1 233 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 SLCO6A1Q86UG4 719 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 HEATR4Q86WZ0 1026 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 HID1Q8IV36 788 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 TAB3Q8N5C8 712 aaPredicted RBP12.65□□□□□ -0.38
LSM5-201ENST00000223084 PNPLA1Q8N8W4 532 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 ZNF548Q8NEK5 533 aaPredicted RBP12.65□□□□□ -0.38
LSM5-201ENST00000223084 UBE2Q2Q8WVN8 375 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 OR1E3Q8WZA6 343 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 AP2M1Q96CW1 435 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 CNDP2Q96KP4 475 aaKnown RBP12.65□□□□□ -0.38
LSM5-201ENST00000223084 WDR92Q96MX6 357 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 WDR24Q96S15 920 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 CDC6Q99741 560 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 FICDQ9BVA6 458 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 RIOK2Q9BVS4 552 aaKnown RBP12.65□□□□□ -0.38
LSM5-201ENST00000223084 WDR26Q9H7D7 661 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 MAGEE1Q9HCI5 957 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 MRPL40Q9NQ50 206 aaKnown RBP12.65□□□□□ -0.38
LSM5-201ENST00000223084 KLQ9UEF7 1012 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 FTSJ1Q9UET6 329 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 APOBEC3BQ9UH17 382 aaKnown RBP12.65□□□□□ -0.38
LSM5-201ENST00000223084 PYCARDQ9ULZ3 195 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 ZNF711Q9Y462 761 aa12.65□□□□□ -0.38
LSM5-201ENST00000223084 LRP4O75096 1905 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 C5orf60A6NFR6 353 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 H3BM21 787 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 ZSCAN12O43309 604 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 SIGLEC6O43699 453 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 CEP104O60308 925 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 GCATO75600 419 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 ANXA9O76027 345 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 LDOC1O95751 146 aaPredicted RBP12.64□□□□□ -0.39
LSM5-201ENST00000223084 TOP3BO95985 862 aaKnown RBP12.64□□□□□ -0.39
LSM5-201ENST00000223084 FGGP02679 453 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 CELA2BP08218 269 aaPredicted RBP12.64□□□□□ -0.39
LSM5-201ENST00000223084 ADRB1P08588 477 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 FTH1P19P0C7X4 201 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 GIMD1P0DJR0 217 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 MYF5P13349 255 aa12.64□□□□□ -0.39
LSM5-201ENST00000223084 TSHRP16473 764 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms