RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 FAM47BQ8NA70 645 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 PHF12Q96QT6 1004 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 PKMYT1Q99640 499 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 ARMC1Q9NVT9 282 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 DNAJC15Q9Y5T4 150 aa17.28■□□□□ 0.36
USB1-201ENST00000219281 COL4A4P53420 1690 aaPredicted RBP17.27■□□□□ 0.36
USB1-201ENST00000219281 hCG_2014768A0A024R1R8 64 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 LRRC14BA6NHZ5 514 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 POMCP01189 267 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 CDK9P50750 372 aaKnown RBP17.27■□□□□ 0.36
USB1-201ENST00000219281 HERVK_113P63132 956 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 SLC10A7Q0GE19 358 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 GEN1Q17RS7 908 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 TBCELQ5QJ74 424 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 MFSD14CQ5VZR4 134 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 LPCAT2Q7L5N7 544 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 SCD5Q86SK9 330 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 SPPL2CQ8IUH8 684 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 TFAP2CQ92754 450 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 PABPC5Q96DU9 382 aaKnown RBP17.27■□□□□ 0.36
USB1-201ENST00000219281 ERVK-6Q9BXR3 956 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 CLK4Q9HAZ1 481 aaKnown RBP17.27■□□□□ 0.36
USB1-201ENST00000219281 RGS18Q9NS28 235 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 OSER1Q9NX31 292 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 GALNT8Q9NY28 637 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 EGFL7Q9UHF1 273 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 DSEQ9UL01 958 aa17.27■□□□□ 0.36
USB1-201ENST00000219281 HEMK1Q9Y5R4 338 aaPredicted RBP17.27■□□□□ 0.36
USB1-201ENST00000219281 SEPT4O43236 478 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 SLC7A4O43246 635 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 PAPSS2O95340 614 aaPredicted RBP17.27■□□□□ 0.35
USB1-201ENST00000219281 SIX3O95343 332 aaPredicted RBP17.27■□□□□ 0.35
USB1-201ENST00000219281 MMP2P08253 660 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 UGT1A6P19224 532 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 RENBPP51606 427 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 NKX3-2P78367 333 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 CACNB2Q08289 660 aaPredicted RBP17.27■□□□□ 0.35
USB1-201ENST00000219281 SREBF2Q12772 1141 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 CAPRIN1Q14444 709 aaKnown RBP17.27■□□□□ 0.35
USB1-201ENST00000219281 TBC1D25Q3MII6 688 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 GAB3Q8WWW8 586 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 HMCESQ96FZ2 354 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 GPATCH1Q9BRR8 931 aaKnown RBP17.27■□□□□ 0.35
USB1-201ENST00000219281 MFSD1Q9H3U5 465 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 NMUR1Q9HB89 426 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 MID1IP1Q9NPA3 183 aa17.27■□□□□ 0.35
USB1-201ENST00000219281 CCM2LQ9NUG4 571 aaPredicted RBP17.27■□□□□ 0.35
USB1-201ENST00000219281 FAM149AA5PLN7 773 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 BBIP1A8MTZ0 92 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 MGEA5O60502 916 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 CDK14O94921 469 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 CD1DP15813 335 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 GRIK1P39086 918 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 MLLT6P55198 1093 aaPredicted RBP17.26■□□□□ 0.35
USB1-201ENST00000219281 FOXA1P55317 472 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 YBX1P67809 324 aaKnown RBP17.26■□□□□ 0.35
USB1-201ENST00000219281 GRB7Q14451 532 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 PIK3R6Q5UE93 754 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 MARC1Q5VT66 337 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 GALNT7Q86SF2 657 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 ZNF354CQ86Y25 554 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 LRRC49Q8IUZ0 686 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 CBR4Q8N4T8 237 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 PTGR2Q8N8N7 351 aaPredicted RBP17.26■□□□□ 0.35
USB1-201ENST00000219281 ZUFSPQ96AP4 578 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 SLC8A2Q9UPR5 921 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 A0A1W2PQH9 124 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 MROH6A6NGR9 719 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 PIP5K1BO14986 540 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 ASGR1P07306 291 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 CAPN3P20807 821 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 FCGRTP55899 365 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 PRKCZQ05513 592 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 SIRPB2Q5JXA9 342 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 IRAK1BP1Q5VVH5 260 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 ERI1Q8IV48 349 aaKnown RBP17.26■□□□□ 0.35
USB1-201ENST00000219281 DDIASQ8IXT1 998 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 HM13Q8TCT9 377 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 TWIST2Q8WVJ9 160 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 KCNA7Q96RP8 456 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 HOPXQ9BPY8 73 aaPredicted RBP17.26■□□□□ 0.35
USB1-201ENST00000219281 POLR3BQ9NW08 1133 aaPredicted RBP17.26■□□□□ 0.35
USB1-201ENST00000219281 GIT1Q9Y2X7 761 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 NDUFAF1Q9Y375 327 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 SQORQ9Y6N5 450 aa17.26■□□□□ 0.35
USB1-201ENST00000219281 UBXN8O00124 270 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 TPST1O60507 370 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 GNAO1P09471 354 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 HAPLN1P10915 354 aaPredicted RBP17.25■□□□□ 0.35
USB1-201ENST00000219281 SLC26A3P40879 764 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 TUBA4AP68366 448 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 NFKB2Q00653 900 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 PTPRCAPQ14761 206 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 KCNA10Q16322 511 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 OVOS1Q6IE37 1185 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 ZNF549Q6P9A3 640 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 MRPL10Q7Z7H8 261 aaKnown RBP17.25■□□□□ 0.35
USB1-201ENST00000219281 SLC15A3Q8IY34 581 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 MIER2Q8N344 545 aa17.25■□□□□ 0.35
USB1-201ENST00000219281 TBATAQ96M53 351 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms