RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 NELL1Q92832 810 aa27.21■■□□□ 1.95
CHMP4B-201ENST00000217402 KIFC1Q9BW19 673 aa27.21■■□□□ 1.95
CHMP4B-201ENST00000217402 DLL1O00548 723 aa27.2■■□□□ 1.95
CHMP4B-201ENST00000217402 WNT9AO14904 365 aa27.2■■□□□ 1.95
CHMP4B-201ENST00000217402 TNFRSF8P28908 595 aa27.2■■□□□ 1.95
CHMP4B-201ENST00000217402 SPINT3P49223 89 aa27.2■■□□□ 1.95
CHMP4B-201ENST00000217402 SGCGQ13326 291 aa27.2■■□□□ 1.95
CHMP4B-201ENST00000217402 LAMB3Q13751 1172 aa27.2■■□□□ 1.95
CHMP4B-201ENST00000217402 TSTD2Q5T7W7 516 aa27.2■■□□□ 1.95
CHMP4B-201ENST00000217402 ALS2CLQ60I27 953 aa27.2■■□□□ 1.95
CHMP4B-201ENST00000217402 FBXO36Q8NEA4 188 aa27.2■■□□□ 1.95
CHMP4B-201ENST00000217402 PTCD2Q8WV60 388 aaKnown RBP27.2■■□□□ 1.95
CHMP4B-201ENST00000217402 SNX19Q92543 992 aa27.2■■□□□ 1.95
CHMP4B-201ENST00000217402 EBNA1BP2Q99848 306 aaKnown RBP27.2■■□□□ 1.95
CHMP4B-201ENST00000217402 PLXND1Q9Y4D7 1925 aa27.2■■□□□ 1.94
CHMP4B-201ENST00000217402 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 PAK4O96013 591 aaPredicted RBP27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 IGHV4-34P06331 123 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 BPIP17213 487 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 NMBRP28336 390 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 NUBP1P53384 320 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 TMEFF1Q8IYR6 380 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 BIRC7Q96CA5 298 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 NUS1Q96E22 293 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 MFSD3Q96ES6 412 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 DTD2Q96FN9 168 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 C1QTNF2Q9BXJ5 285 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 PARD6BQ9BYG5 372 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 SLC17A9Q9BYT1 436 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 TEX264Q9Y6I9 313 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 ZNF318Q5VUA4 2279 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 EIF3HO15372 352 aaKnown RBP eCLIP27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 SLC31A1O15431 190 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 HRO43593 1189 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 CCR5P51681 352 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 NLRP9Q7RTR0 991 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 TECPR1Q7Z6L1 1165 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 GPR26Q8NDV2 337 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 STYXQ8WUJ0 223 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 ZNF669Q96BR6 464 aaPredicted RBP27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 LRRC39Q96DD0 335 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 CFAP36Q96G28 342 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 MYOCQ99972 504 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 MRM3Q9HC36 420 aaKnown RBP27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 FZD3Q9NPG1 666 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 NLE1Q9NVX2 485 aaPredicted RBP27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 FKBPLQ9UIM3 349 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 ZBTB32Q9Y2Y4 487 aaPredicted RBP27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 LRRK1Q38SD2 2015 aa27.19■■□□□ 1.94
CHMP4B-201ENST00000217402 PGAM1P18669 254 aa27.18■■□□□ 1.94
CHMP4B-201ENST00000217402 SKIDA1Q1XH10 827 aa27.18■■□□□ 1.94
CHMP4B-201ENST00000217402 ESRP1Q6NXG1 681 aaKnown RBP27.18■■□□□ 1.94
CHMP4B-201ENST00000217402 WDR93Q6P2C0 686 aa27.18■■□□□ 1.94
CHMP4B-201ENST00000217402 CCNI2Q6ZMN8 369 aaPredicted RBP27.18■■□□□ 1.94
CHMP4B-201ENST00000217402 MICALCLQ6ZW33 695 aa27.18■■□□□ 1.94
CHMP4B-201ENST00000217402 OR13J1Q8NGT2 312 aa27.18■■□□□ 1.94
CHMP4B-201ENST00000217402 SCAMP4Q969E2 229 aa27.18■■□□□ 1.94
CHMP4B-201ENST00000217402 PHACTR1Q9C0D0 580 aa27.18■■□□□ 1.94
CHMP4B-201ENST00000217402 ZC3H7BQ9UGR2 993 aaKnown RBP27.18■■□□□ 1.94
CHMP4B-201ENST00000217402 RPS6KL1Q9Y6S9 549 aa27.18■■□□□ 1.94
CHMP4B-201ENST00000217402 FAM237BA0A1B0GVD1 139 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 MAGEB16A2A368 324 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 C10orf142B7Z368 130 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 LATO43561 262 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 FAM153BP0C7A2 387 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 ARSDP51689 593 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 SMAD1Q15797 465 aaKnown RBP27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 FAM153CQ494X1 144 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 ARMCX6Q7L4S7 300 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 EIF1ADQ8N9N8 165 aaKnown RBP27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 ZBTB44Q8NCP5 570 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 CADM4Q8NFZ8 388 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 PYROXD1Q8WU10 500 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 HSPA12BQ96MM6 686 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 TRPM6Q9BX84 2022 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 SCN8AQ9UQD0 1980 aa27.17■■□□□ 1.94
CHMP4B-201ENST00000217402 MEI4A8MW99 385 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 SPAM1P38567 509 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 SETMARQ53H47 684 aaPredicted RBP27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 FAM151BQ6UXP7 276 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 CAPN12Q6ZSI9 719 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 CEP68Q76N32 757 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 CYP2U1Q7Z449 544 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 SLC41A1Q8IVJ1 513 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 AP2M1Q96CW1 435 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 C9orf72Q96LT7 481 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 RIOK2Q9BVS4 552 aaKnown RBP27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 PCED1AQ9H1Q7 454 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 ABCG8Q9H221 673 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 FAM83DQ9H4H8 585 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 SUDS3Q9H7L9 328 aaPredicted RBP27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 EBF2Q9HAK2 575 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 TREX1Q9NSU2 369 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 METTL12A8MUP2 240 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 RAD51BO15315 384 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 POLBP06746 335 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 HADHAP40939 763 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 MAGEA4P43358 317 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 CREB5Q02930 508 aa27.16■■□□□ 1.94
CHMP4B-201ENST00000217402 ANKRD20A4Q4UJ75 823 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms