RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 UROC1Q96N76 676 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 CAAP1Q9H8G2 361 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 C8orf4Q9NR00 106 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 GID8Q9NWU2 228 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 TUBA8Q9NY65 449 aaPredicted RBP13.3□□□□□ -0.28
SRP54-201ENST00000216774 MAP10Q9P2G4 905 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 MIA3Q5JRA6 1907 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 TANC1Q9C0D5 1861 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 NME4O00746 187 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 AZIN1O14977 448 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 ANGPT2O15123 496 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 POMCP01189 267 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 CHRNA1P02708 482 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 ATXN1LP0C7T5 689 aaKnown RBP13.3□□□□□ -0.28
SRP54-201ENST00000216774 CDK4P11802 303 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 TSPAN8P19075 237 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 TYMPP19971 482 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 PCSK6P29122 969 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 TUSC3Q13454 348 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 LCN8Q6JVE9 175 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 MRNIPQ6NTE8 343 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 MSANTD2Q6P1R3 559 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 TFAP2DQ7Z6R9 452 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 LDB1Q86U70 411 aaPredicted RBP13.3□□□□□ -0.28
SRP54-201ENST00000216774 SPNS2Q8IVW8 549 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 FIBCD1Q8N539 461 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 PTGR2Q8N8N7 351 aaPredicted RBP13.3□□□□□ -0.28
SRP54-201ENST00000216774 OR52K2Q8NGK3 314 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 TWIST2Q8WVJ9 160 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 FEM1CQ96JP0 617 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 SP110Q9HB58 689 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 SDR39U1Q9NRG7 319 aaPredicted RBP13.3□□□□□ -0.28
SRP54-201ENST00000216774 UXTQ9UBK9 157 aaPredicted RBP13.3□□□□□ -0.28
SRP54-201ENST00000216774 PTBP2Q9UKA9 531 aaKnown RBP13.3□□□□□ -0.28
SRP54-201ENST00000216774 MRPL42Q9Y6G3 142 aaKnown RBP13.3□□□□□ -0.28
SRP54-201ENST00000216774 PCNTO95613 3336 aa13.3□□□□□ -0.28
SRP54-201ENST00000216774 DHRS12A0PJE2 317 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 SOCS2O14508 198 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 KPNA6O60684 536 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 VPS4BO75351 444 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 GLP2RO95838 553 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 C7P10643 843 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 HAPLN1P10915 354 aaPredicted RBP13.29□□□□□ -0.28
SRP54-201ENST00000216774 CKMT2P17540 419 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 IL10P22301 178 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 BTG3Q14201 252 aaPredicted RBP13.29□□□□□ -0.28
SRP54-201ENST00000216774 IHHQ14623 411 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 TBCELQ5QJ74 424 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 MON1AQ86VX9 555 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 PHYKPLQ8IUZ5 450 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 TNIP2Q8NFZ5 429 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 ARRDC2Q8TBH0 407 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 GFM2Q969S9 779 aaKnown RBP13.29□□□□□ -0.28
SRP54-201ENST00000216774 PABPC5Q96DU9 382 aaKnown RBP13.29□□□□□ -0.28
SRP54-201ENST00000216774 SUSD3Q96L08 255 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 ZNF512Q96ME7 567 aaPredicted RBP13.29□□□□□ -0.28
SRP54-201ENST00000216774 KLHL5Q96PQ7 755 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 PTPN18Q99952 460 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 TFB2MQ9H5Q4 396 aaKnown RBP13.29□□□□□ -0.28
SRP54-201ENST00000216774 ZNF408Q9H9D4 720 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 SPON1Q9HCB6 807 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 MID1IP1Q9NPA3 183 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 AGPAT4Q9NRZ5 378 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 ACTR3BQ9P1U1 418 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 NUDT5Q9UKK9 219 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 IGLV3-10A0A075B6K4 115 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 TRIM64CA6NLI5 447 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 FXYD1O00168 92 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 PIP5K1BO14986 540 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 CTSHP09668 335 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 IDO1P14902 403 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 ZNF37AP17032 561 aaPredicted RBP13.29□□□□□ -0.28
SRP54-201ENST00000216774 CAPN3P20807 821 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 PSMA4P25789 261 aaKnown RBP13.29□□□□□ -0.28
SRP54-201ENST00000216774 CDH13P55290 713 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 NME5P56597 212 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 TIAL1Q01085 375 aaKnown RBP eCLIP13.29□□□□□ -0.286e-7■■■■□ 24.2
SRP54-201ENST00000216774 PITRM1Q5JRX3 1037 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 ZNF549Q6P9A3 640 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 SLC15A3Q8IY34 581 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 PNPLA1Q8N8W4 532 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 FAM47BQ8NA70 645 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 HASPINQ8TF76 798 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 TSPEARQ8WU66 669 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 LZICQ8WZA0 190 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 BIRC8Q96P09 236 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 MUC13Q9H3R2 512 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 SCML2Q9UQR0 700 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 CRYL1Q9Y2S2 319 aa13.29□□□□□ -0.28
SRP54-201ENST00000216774 OR51F1A6NGY5 319 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 CCL22O00626 93 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 CD3EAPO15446 510 aaKnown RBP13.28□□□□□ -0.28
SRP54-201ENST00000216774 RPLP2P05387 115 aaKnown RBP13.28□□□□□ -0.28
SRP54-201ENST00000216774 MTHFD2P13995 350 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 LBPP18428 481 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 HLA-DPA1P20036 260 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 MYF6P23409 242 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 DCTN2Q13561 401 aaKnown RBP13.28□□□□□ -0.28
SRP54-201ENST00000216774 OR4D1Q15615 310 aa13.28□□□□□ -0.28
SRP54-201ENST00000216774 GEN1Q17RS7 908 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms