RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 TNFSF13BQ9Y275 285 aa13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 HBS1LQ9Y450 684 aaKnown RBP13.61□□□□□ -0.23
TGFBR3-201ENST00000212355 hCG_2039718K7EN88 272 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 TLR5O60602 858 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 SMAD3P84022 425 aaKnown RBP13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 AMPD2Q01433 879 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 HECTD2Q5U5R9 776 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 PHF13Q86YI8 300 aaPredicted RBP13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 LENG9Q96B70 501 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 ZCCHC2Q9C0B9 1178 aaKnown RBP13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 ATP13A3Q9H7F0 1226 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 HMX1Q9NP08 348 aaPredicted RBP13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 AASDHPPTQ9NRN7 309 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 INTS7Q9NVH2 962 aaKnown RBP13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 FGF10O15520 208 aaPredicted RBP13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 PRKAA2P54646 552 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 TSC22D1Q15714 1073 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 TAB1Q15750 504 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 NIPA1Q7RTP0 329 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 FAM35AQ86V20 835 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 OR52L1Q8NGH7 329 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 CXorf40BQ96DE9 158 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 MFSD3Q96ES6 412 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 MRPL48Q96GC5 212 aaKnown RBP13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 APOLD1Q96LR9 279 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 CTPS2Q9NRF8 586 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 CLCN5P51795 746 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 PAGE2BQ5JRK9 111 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 OLFML2AQ68BL7 652 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 TRIM40Q6P9F5 258 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 IRF2BP1Q8IU81 584 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 SAMD3Q8N6K7 520 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 SHC3Q92529 594 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 FBXO5Q9UKT4 447 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 COL3A1P02461 1466 aaPredicted RBP13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 SLC22A3O75751 556 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 CHRNGP07510 517 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 JAK1P23458 1154 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 POLR2LP62875 67 aaKnown RBP13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 TMEM63BQ5T3F8 832 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 FAM131AQ6UXB0 335 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 SIDT2Q8NBJ9 832 aaKnown RBP13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 C11orf16Q9NQ32 467 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 GNB5O14775 395 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 GSC2O15499 205 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 COPZ1P61923 177 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 REP15Q6BDI9 236 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 SATL1Q86VE3 508 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 ZNF781Q8N8C0 355 aa13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 PDP1Q9P0J1 537 aaPredicted RBP13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 AJAP1Q9UKB5 411 aaPredicted RBP13.6□□□□□ -0.23
TGFBR3-201ENST00000212355 PREX1Q8TCU6 1659 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 LRRC10BA6NIK2 292 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 TRIM3O75382 744 aaPredicted RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 TUFMP49411 452 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 MANFP55145 182 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 SPIRE1Q08AE8 756 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 CHPFQ8IZ52 775 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 TMEM86AQ8N2M4 240 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 KLK6Q92876 244 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 PMEPA1Q969W9 287 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 CDK15Q96Q40 435 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 CITED4Q96RK1 184 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 MALT1Q9UDY8 824 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 RAB23Q9ULC3 237 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 ZNF232Q9UNY5 417 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 STON1Q9Y6Q2 735 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 NRCAMQ92823 1304 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 GTPBP1O00178 669 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 HDAC3O15379 428 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 ATP5BP06576 529 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 BPGMP07738 259 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 AZGP1P25311 298 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 GABRR2P28476 465 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 TTPAP49638 278 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 CLCNKBP51801 687 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 DGKEP52429 567 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 SFSWAPQ12872 951 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 IKBKEQ14164 716 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 PCBP2Q15366 365 aaKnown RBP eCLIP13.59□□□□□ -0.232e-6■■■■■ 28.2
TGFBR3-201ENST00000212355 KRT73Q86Y46 540 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 RIOX2Q8IUF8 465 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 IQCF2Q8IXL9 164 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 GPR65Q8IYL9 337 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 CCNA2P20248 432 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 AXLP30530 894 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 OR1D2P34982 312 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 MATKP42679 507 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 CEBPGP53567 150 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 PCDH1Q08174 1060 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 NT5DC4Q86YG4 428 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 NKAPQ8N5F7 415 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 FITM2Q8N6M3 262 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 FAM13CQ8NE31 585 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 MTFR1LQ9H019 292 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 TRNAU1APQ9NX07 287 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 CDH22Q9UJ99 828 aa13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 FCF1Q9Y324 198 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 EDF1O60869 148 aaKnown RBP13.59□□□□□ -0.23
TGFBR3-201ENST00000212355 MLYCDO95822 493 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms