RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 SSU72Q9NP77 194 aaKnown RBP10.45□□□□□ -0.74
VCL-201ENST00000211998 CLEC4AQ9UMR7 237 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 PHF24Q9UPV7 400 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 A0A1W2PPW3 197 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 ITM2AO43736 263 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 RPLP0P05388 317 aaKnown RBP10.45□□□□□ -0.74
VCL-201ENST00000211998 ITGB6P18564 788 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 PSMB4P28070 264 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 YAP1P46937 504 aaKnown RBP10.45□□□□□ -0.74
VCL-201ENST00000211998 IDH3AP50213 366 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 PAN2Q504Q3 1202 aaKnown RBP10.45□□□□□ -0.74
VCL-201ENST00000211998 REP15Q6BDI9 236 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 OVOS1Q6IE37 1185 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 ZNF517Q6ZMY9 492 aaPredicted RBP10.45□□□□□ -0.74
VCL-201ENST00000211998 ZNF438Q7Z4V0 828 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 UBR7Q8N806 425 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 PANX3Q96QZ0 392 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 KCNQ5Q9NR82 932 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 DDX43Q9NXZ2 648 aaKnown RBP10.45□□□□□ -0.74
VCL-201ENST00000211998 IGSF9Q9P2J2 1179 aa10.45□□□□□ -0.74
VCL-201ENST00000211998 A0A0J9YVX5 310 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 AURKAO14965 403 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 MAGEB3O15480 346 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 TSPAN3O60637 253 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 SNX4O95219 450 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 CXCL8P10145 99 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 PRKACAP17612 351 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 CTSKP43235 329 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 NUMBP49757 651 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 PON2Q15165 354 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 NBPF12Q5TAG4 269 aaPredicted RBP10.44□□□□□ -0.74
VCL-201ENST00000211998 OR2T12Q8NG77 320 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 RPS6KB2Q9UBS0 482 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 DHRS7Q9Y394 339 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 hCG_1818297A0A087WSY0 165 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 ANKRD63C9JTQ0 380 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 CABYRO75952 493 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 INSRRP14616 1297 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 TIGD2Q4W5G0 525 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 KLHL24Q6TFL4 600 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 GPSM1Q86YR5 675 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 SMARCD1Q96GM5 515 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 OSMRQ99650 979 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 NEK6Q9HC98 313 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 PDP1Q9P0J1 537 aaPredicted RBP10.44□□□□□ -0.74
VCL-201ENST00000211998 TCRBV7S2A1N4TA0A589 114 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 GPIP06744 558 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 PRG2P13727 222 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 ITGA2P17301 1181 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 SHMT1P34896 483 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 ALDH9A1P49189 494 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 RAB10P61026 200 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 FASTKD3Q14CZ7 662 aaKnown RBP10.44□□□□□ -0.74
VCL-201ENST00000211998 NEPROQ6NW34 567 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 AFTPHQ6ULP2 937 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 PTF1AQ7RTS3 328 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 IRF2BP1Q8IU81 584 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 SERPINB11Q96P15 392 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 ERVK-11Q9UQG0 969 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 A0A0A0MRY4 1105 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 A0A1B0GVG6 124 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 SH3PXD2BA1X283 911 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 SLC22A3O75751 556 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 ECDO95905 644 aaPredicted RBP10.44□□□□□ -0.74
VCL-201ENST00000211998 CKBP12277 381 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 AKR1A1P14550 325 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 TFEBP19484 476 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 SWI5Q1ZZU3 235 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 INTS11Q5TA45 600 aaKnown RBP10.44□□□□□ -0.74
VCL-201ENST00000211998 MARC1Q5VT66 337 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 PEG10Q86TG7 708 aaKnown RBP10.44□□□□□ -0.74
VCL-201ENST00000211998 RIOX2Q8IUF8 465 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 REPS2Q8NFH8 660 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 TP53INP1Q96A56 240 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 SPATA13Q96N96 652 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 CHIAQ9BZP6 476 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 IL22Q9GZX6 179 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 ACSS2Q9NR19 701 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 CEP170BQ9Y4F5 1589 aaPredicted RBP10.44□□□□□ -0.74
VCL-201ENST00000211998 GSAPA4D1B5 854 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 HTR3EA5X5Y0 456 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 H3BM21 787 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 H7C2Y5 167 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 PDHXO00330 501 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 MID1O15344 667 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 UMPSP11172 480 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 CDH1P12830 882 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 DNAJB2P25686 324 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 ABL2P42684 1182 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 TAS2R40P59535 323 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 MYBPC1Q00872 1141 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 SNAPC1Q16533 368 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 CYP2U1Q7Z449 544 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 RALGPS2Q86X27 583 aaPredicted RBP10.44□□□□□ -0.74
VCL-201ENST00000211998 PSTKQ8IV42 348 aaKnown RBP10.44□□□□□ -0.74
VCL-201ENST00000211998 MSANTD3Q96H12 275 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 AKAP7Q9P0M2 348 aaPredicted RBP10.44□□□□□ -0.74
VCL-201ENST00000211998 KLQ9UEF7 1012 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 CPA4Q9UI42 421 aa10.44□□□□□ -0.74
VCL-201ENST00000211998 MKLN1Q9UL63 735 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms