RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 SLC5A2P31639 672 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 ZBED6P86452 979 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 CDK3Q00526 305 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 B4GALNT1Q00973 533 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 SQSTM1Q13501 440 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 HSD11B1LQ7Z5J1 315 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 HEATR4Q86WZ0 1026 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 SLITRK4Q8IW52 837 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 SFTPA2Q8IWL1 248 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 ATPAF2Q8N5M1 289 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 NSMCE1Q8WV22 266 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 MAML1Q92585 1016 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 HSPH1Q92598 858 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 CCNL2Q96S94 520 aaPredicted RBP15.86■□□□□ 0.13
ERCC1-201ENST00000013807 GSDMCQ9BYG8 508 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 FOXP3Q9BZS1 431 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 DPEP2Q9H4A9 486 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 EPB41L5Q9HCM4 733 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 SPATS2LQ9NUQ6 558 aaKnown RBP15.86■□□□□ 0.13
ERCC1-201ENST00000013807 CAPN11Q9UMQ6 739 aa15.86■□□□□ 0.13
ERCC1-201ENST00000013807 A0A087X0T9 212 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 B4GAT1O43505 415 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 SOD1P00441 154 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 IVLP07476 585 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 FAM228BP0C875 321 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 ETV3P41162 512 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 GPR3P46089 330 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 GALNT2Q10471 571 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 PEX6Q13608 980 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 PAFAH1B3Q15102 231 aaKnown RBP15.85■□□□□ 0.13
ERCC1-201ENST00000013807 TCEA2Q15560 299 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 ARMC12Q5T9G4 340 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 FOXR1Q6PIV2 292 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 CCDC81Q6ZN84 652 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 Q6ZVL8 140 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 USP45Q70EL2 814 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 ZNF765Q7L2R6 523 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 PAF1Q8N7H5 531 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 TSGA13Q96PP4 275 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 ANAPC7Q9UJX3 599 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 NENFQ9UMX5 172 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 ST14Q9Y5Y6 855 aa15.85■□□□□ 0.13
ERCC1-201ENST00000013807 BOD1L1Q8NFC6 3051 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.84■□□□□ 0.13
ERCC1-201ENST00000013807 MYO1FO00160 1098 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 CPNE6O95741 557 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 PDHA1P08559 390 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 ZNF30P17039 623 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 GARSP41250 739 aaKnown RBP15.84■□□□□ 0.13
ERCC1-201ENST00000013807 MAXP61244 160 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 PTSQ03393 145 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 ILF3Q12906 894 aaKnown RBP eCLIP15.84■□□□□ 0.13
ERCC1-201ENST00000013807 ARHGEF7Q14155 803 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 TAF1BQ53T94 588 aaPredicted RBP15.84■□□□□ 0.13
ERCC1-201ENST00000013807 CAVIN1Q6NZI2 390 aaKnown RBP15.84■□□□□ 0.13
ERCC1-201ENST00000013807 ALKBH5Q6P6C2 394 aaKnown RBP15.84■□□□□ 0.13
ERCC1-201ENST00000013807 ADAMTSL4Q6UY14 1074 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 TMPRSS9Q7Z410 1059 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 ZNF605Q86T29 641 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 NDUFAF2Q8N183 169 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 PDCD6IPQ8WUM4 868 aaKnown RBP15.84■□□□□ 0.13
ERCC1-201ENST00000013807 CMKLR1Q99788 373 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 NUP85Q9BW27 656 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 SYNDIG1Q9H7V2 258 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 CARS2Q9HA77 564 aaKnown RBP15.84■□□□□ 0.13
ERCC1-201ENST00000013807 TAAR2Q9P1P5 351 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 SPTA1P02549 2419 aa15.84■□□□□ 0.13
ERCC1-201ENST00000013807 A0A0J9YYE9 177 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 B4DGG1 531 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 MATN3O15232 486 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 ZW10O43264 779 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 TRBC1P01850 177 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 PYGLP06737 847 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 JMJD7P0C870 316 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 KRT10P13645 584 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 PLA2G2AP14555 144 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 CCNCP24863 283 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 HNRNPH3P31942 346 aaKnown RBP15.83■□□□□ 0.12
ERCC1-201ENST00000013807 FANCCQ00597 558 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 DPYSL3Q14195 570 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 IHHQ14623 411 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 TDRD12Q587J7 1177 aaKnown RBP15.83■□□□□ 0.12
ERCC1-201ENST00000013807 XKR5Q6UX68 686 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 TSPAN33Q86UF1 283 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 PIM3Q86V86 326 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 DTX1Q86Y01 620 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 NAGSQ8N159 534 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 Q8N9G6 341 aaPredicted RBP15.83■□□□□ 0.12
ERCC1-201ENST00000013807 ZDHHC1Q8WTX9 485 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 FAF2Q96CS3 445 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 BTBD6Q96KE9 485 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 LYSMD1Q96S90 227 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 SEMA3CQ99985 751 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 ZNF670Q9BS34 389 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.83■□□□□ 0.12
ERCC1-201ENST00000013807 POLR1EQ9GZS1 481 aaKnown RBP15.83■□□□□ 0.12
ERCC1-201ENST00000013807 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.83■□□□□ 0.12
ERCC1-201ENST00000013807 SUFUQ9UMX1 484 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 LOXL2Q9Y4K0 774 aa15.83■□□□□ 0.12
ERCC1-201ENST00000013807 MYO18BQ8IUG5 2567 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms