RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CABYRO75952 493 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 MYCLP1P12525 358 aaPredicted RBP12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 HTRA3P83110 453 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 TRAP1Q12931 704 aaKnown RBP12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 QPRTQ15274 297 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 ZSWIM7Q19AV6 140 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 PYROXD2Q8N2H3 581 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 PGLYRP2Q96PD5 576 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 TWNKQ96RR1 684 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 COPS4Q9BT78 406 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 FZD8Q9H461 694 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 PDZD7Q9H5P4 517 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 ACSS2Q9NR19 701 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 MBD2Q9UBB5 411 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 GNPTGQ9UJJ9 305 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 FBXO5Q9UKT4 447 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 VPS4AQ9UN37 437 aa12.15□□□□□ -0.47
TSPAN9-201ENST00000011898 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 ZNF197O14709 1029 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 SYNCRIPO60506 623 aaKnown RBP12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 PLIN3O60664 434 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 CSH1P0DML2 217 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 CSH2P0DML3 217 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 HNRNPLP14866 589 aaKnown RBP eCLIP12.14□□□□□ -0.473e-8■■■□□ 17.3
TSPAN9-201ENST00000011898 ATP5F1P24539 256 aaPredicted RBP12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 SLC11A2P49281 568 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 SLC18A1P54219 525 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 BEX3Q00994 111 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 ZNF177Q13360 481 aaPredicted RBP12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 AHI1Q8N157 1196 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 RASSF5Q8WWW0 418 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 MFSD3Q96ES6 412 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 HGH1Q9BTY7 390 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 DUSP16Q9BY84 665 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 OGDHLQ9ULD0 1010 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 NR2E3Q9Y5X4 410 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 ST14Q9Y5Y6 855 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 PTPRJQ12913 1337 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 BUD23O43709 281 aaKnown RBP12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 METTL18O95568 372 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 ZNF806P0C7X5 589 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 OR1E1P30953 314 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 PSEN2P49810 448 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 SCNN1GP51170 649 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 HK2P52789 917 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 ATXN1P54253 815 aaKnown RBP12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 TBX4P57082 545 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 KLF10Q13118 480 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 KLF1Q13351 362 aaPredicted RBP12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 CA9Q16790 459 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 PRAMEF19Q5SWL8 479 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 LIPMQ5VYY2 423 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 C9orf57Q5W0N0 161 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 TTC23Q5W5X9 447 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 ANKS6Q68DC2 871 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 TMEM86AQ8N2M4 240 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 RP9Q8TA86 221 aaKnown RBP12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 DHRS1Q96LJ7 313 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 ALG9Q9H6U8 611 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 UCKL1Q9NWZ5 548 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 BAIAP2Q9UQB8 552 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 SYNDIG1LA6NDD5 238 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 TOP3BO95985 862 aaKnown RBP12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 TSPAN8P19075 237 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 MBTD1Q05BQ5 628 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 INSCQ1MX18 579 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 CTXN3Q4LDR2 81 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 ATP6AP1LQ52LC2 224 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 SZRD1Q7Z422 152 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 MIER2Q8N344 545 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 FBXO39Q8N4B4 442 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 CAMKK1Q8N5S9 505 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 KBTBD7Q8WVZ9 684 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 KCTD14Q9BQ13 255 aaPredicted RBP12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 ZSCAN5AQ9BUG6 496 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 RIBC2Q9H4K1 309 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 CHRAC1Q9NRG0 131 aa12.14□□□□□ -0.47
TSPAN9-201ENST00000011898 SMIM28A0A1B0GU29 152 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 ANKRD33BA6NCL7 494 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 TMCC2O75069 709 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 RAB10P61026 200 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 MSLNQ13421 630 aaPredicted RBP12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 FRG1Q14331 258 aaKnown RBP12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 ZNF792Q3KQV3 632 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 AKIRIN2Q53H80 203 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 DGKKQ5KSL6 1271 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 RHBDF2Q6PJF5 856 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 TMEM26Q6ZUK4 368 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 RAB43Q86YS6 212 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 ZDHHC14Q8IZN3 488 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 SERPINB11Q96P15 392 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 ARHGEF4Q9NR80 690 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 GDAP2Q9NXN4 497 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 TMEM216Q9P0N5 145 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 PTPRFP10586 1907 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 MAP1BP46821 2468 aaKnown RBP12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 LOC110117498-PIK3R3F6TDL0 507 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 TRIM38O00635 465 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 GCATO75600 419 aa12.13□□□□□ -0.47
TSPAN9-201ENST00000011898 ABCB1P08183 1280 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms