RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 ZNF542PQ5EBM4 170 aa12.02□□□□□ -0.48
SYPL1-201ENST00000011473 ANKRD22Q5VYY1 191 aa12.02□□□□□ -0.48
SYPL1-201ENST00000011473 ALS2CLQ60I27 953 aa12.02□□□□□ -0.48
SYPL1-201ENST00000011473 ABI3BPQ7Z7G0 1075 aa12.02□□□□□ -0.48
SYPL1-201ENST00000011473 SPATS2Q86XZ4 545 aaKnown RBP12.02□□□□□ -0.48
SYPL1-201ENST00000011473 DNAAF3Q8N9W5 541 aa12.02□□□□□ -0.48
SYPL1-201ENST00000011473 MFSD2AQ8NA29 543 aa12.02□□□□□ -0.48
SYPL1-201ENST00000011473 CCHCR1Q8TD31 782 aa12.02□□□□□ -0.48
SYPL1-201ENST00000011473 PPP1R2P1Q96PQ5 205 aa12.02□□□□□ -0.48
SYPL1-201ENST00000011473 C1QTNF7Q9BXJ2 289 aa12.02□□□□□ -0.48
SYPL1-201ENST00000011473 RNF14Q9UBS8 474 aa12.02□□□□□ -0.48
SYPL1-201ENST00000011473 ZNF292O60281 2723 aa12.02□□□□□ -0.48
SYPL1-201ENST00000011473 A6NNZ2 444 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 PRR5-ARHGAP8B1AHC4 643 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 PSMD11O00231 422 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 ARHGAP33O14559 1287 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 VILLO15195 856 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 TTI1O43156 1089 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 GPR39O43194 453 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 GAS8O95995 478 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 NUDT1P36639 197 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 DPP6P42658 865 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 PTGIRP43119 386 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 SPINT3P49223 89 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 MSLNQ13421 630 aaPredicted RBP12.02□□□□□ -0.49
SYPL1-201ENST00000011473 PDE1CQ14123 709 aaPredicted RBP12.02□□□□□ -0.49
SYPL1-201ENST00000011473 TEAD4Q15561 434 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 AASDHQ4L235 1098 aaPredicted RBP12.02□□□□□ -0.49
SYPL1-201ENST00000011473 CCDC38Q502W7 563 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 RAET1GQ6H3X3 334 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 TMC3Q7Z5M5 1100 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 GPR26Q8NDV2 337 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 DENND6BQ8NEG7 585 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 GRK7Q8WTQ7 553 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 ASB12Q8WXK4 309 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 AP2M1Q96CW1 435 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 KLHDC7BQ96G42 594 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 TRIM51Q9BSJ1 452 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 EDEM2Q9BV94 578 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 RIOK2Q9BVS4 552 aaKnown RBP12.02□□□□□ -0.49
SYPL1-201ENST00000011473 LGR4Q9BXB1 951 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 ABCG8Q9H221 673 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 PCYOX1Q9UHG3 505 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 RIF1Q5UIP0 2472 aaKnown RBP12.02□□□□□ -0.49
SYPL1-201ENST00000011473 TRPM6Q9BX84 2022 aa12.02□□□□□ -0.49
SYPL1-201ENST00000011473 CCL22O00626 93 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 PFN3P60673 137 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 IL9RQ01113 521 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 DR1Q01658 176 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 AGERQ15109 404 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 HLA-BQ31612 363 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 KCTD16Q68DU8 428 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 KYAT3Q6YP21 454 aaKnown RBP12.01□□□□□ -0.49
SYPL1-201ENST00000011473 PPP1R21Q6ZMI0 780 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 RABEPKQ7Z6M1 372 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 TTC30BQ8N4P2 665 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 ARNT2Q9HBZ2 717 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 ASIC3Q9UHC3 531 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 CDC23Q9UJX2 597 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 PNMA8BQ9ULN7 279 aaPredicted RBP12.01□□□□□ -0.49
SYPL1-201ENST00000011473 HS3ST3A1Q9Y663 406 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.01□□□□□ -0.49
SYPL1-201ENST00000011473 GOLGA8MH3BSY2 632 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 CCDC188H7C350 402 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 SCAMP1O15126 338 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 LRP3O75074 770 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 TMEM63AO94886 807 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 SOD1P00441 154 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 BPIP17213 487 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 HMGCLP35914 325 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 ATXN3P54252 364 aaPredicted RBP12.01□□□□□ -0.49
SYPL1-201ENST00000011473 NXPH1P58417 271 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 CRADDP78560 199 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 TMPRSS15P98073 1019 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 SEPT6Q14141 434 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 TCEA2Q15560 299 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 CERCAMQ5T4B2 595 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 ESRP1Q6NXG1 681 aaKnown RBP12.01□□□□□ -0.49
SYPL1-201ENST00000011473 PNCKQ6P2M8 343 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 TRIM74Q86UV6 250 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 JAMLQ86YT9 394 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 MINDY1Q8N5J2 469 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 CPT1BQ92523 772 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 TRIM31Q9BZY9 425 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 GAREM1Q9H706 876 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.01□□□□□ -0.493e-7■■■■□ 21.2
SYPL1-201ENST00000011473 PKD2L2Q9NZM6 624 aa12.01□□□□□ -0.49
SYPL1-201ENST00000011473 FEZ2Q9UHY8 353 aaPredicted RBP12.01□□□□□ -0.49
SYPL1-201ENST00000011473 ERI2A8K979 691 aaKnown RBP12□□□□□ -0.49
SYPL1-201ENST00000011473 CDX4O14627 284 aaPredicted RBP12□□□□□ -0.49
SYPL1-201ENST00000011473 INPP4BO15327 924 aa12□□□□□ -0.49
SYPL1-201ENST00000011473 AVILO75366 819 aa12□□□□□ -0.49
SYPL1-201ENST00000011473 SUN1O94901 812 aa12□□□□□ -0.49
SYPL1-201ENST00000011473 ADCY8P40145 1251 aa12□□□□□ -0.49
SYPL1-201ENST00000011473 CTSKP43235 329 aa12□□□□□ -0.49
SYPL1-201ENST00000011473 SESN2P58004 480 aaPredicted RBP12□□□□□ -0.49
SYPL1-201ENST00000011473 CDH17Q12864 832 aa12□□□□□ -0.49
SYPL1-201ENST00000011473 KCNJ11Q14654 390 aa12□□□□□ -0.49
SYPL1-201ENST00000011473 HEATR4Q86WZ0 1026 aa12□□□□□ -0.49
SYPL1-201ENST00000011473 OR13C4Q8NGS5 318 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms