RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 InvsO89019 1062 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 RxraP28700 467 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gpr3P35413 330 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ccng1P51945 294 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gucy2eP52785 1108 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 G3bp2P97379 482 aaKnown RBP13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Trappc9Q3U0M1 1148 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ankrd34bQ3UUF8 508 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ampd1Q3V1D3 745 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Zbtb2Q3V3W4 514 aaKnown RBP13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Prss53Q571E5 552 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Khdrbs1Q60749 443 aaKnown RBP13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Jak2Q62120 1129 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ubxn7Q6P5G6 467 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ints6Q6PCM2 883 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Zfp606Q7TSV0 794 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Znf689Q8BKK5 500 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Smoc1Q8BLY1 463 aaKnown RBP13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Osbpl6Q8BXR9 959 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Pdcd2lQ8C5N5 364 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Slc46a2Q8CA03 479 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Fam155aQ8CCS2 467 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Acap1Q8K2H4 740 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Adcy4Q91WF3 1077 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Pdk3Q922H2 415 aaKnown RBP13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Chit1Q9D7Q1 464 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Actrt1Q9D9J3 376 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Lrrc34Q9DAM1 415 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Cul3Q9JLV5 768 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ddx39bQ9Z1N5 428 aaKnown RBP13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Pld1Q9Z280 1074 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Zfc3h1B2RT41 1992 aaKnown RBP13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Baz2bA2AUY4 2123 aa13.34□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gm28168A0A087WNP1 180 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gm3604A0A087WPN2 559 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Armt1A6H630 439 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Cilp2D3Z7H8 1162 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gm20509G3UZF1 325 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Gp1baO35930 734 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Aff3P51827 1254 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Adamts8P57110 905 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Bop1P97452 732 aaKnown RBP13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Lrrc74bQ14BP6 391 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Q32M26 199 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Lcp2Q60787 533 aaKnown RBP13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Slc6a3Q61327 619 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 PhgdhQ61753 533 aaKnown RBP13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Dclk2Q6PGN3 756 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 PolnQ7TQ07 864 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 MtbpQ8BJS8 894 aaKnown RBP13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Slc9a7Q8BLV3 726 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Pggt1bQ8BUY9 377 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ttc34Q8C0Q3 554 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Zbtb8bQ8CII0 484 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Acsm2Q8K0L3 575 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 MfrpQ8K480 584 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Ndufs1Q91VD9 727 aaKnown RBP13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 HnmtQ91VF2 295 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 L2hgdhQ91YP0 464 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Tmco1Q921L3 188 aaKnown RBP13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Plpp3Q99JY8 312 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Chchd3Q9CRB9 227 aaKnown RBP13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 L3hypdhQ9CXA2 354 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Plin3Q9DBG5 437 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Upf1Q9EPU0 1124 aaKnown RBP13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Cmtm7Q9ESD6 167 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Cldn19Q9ET38 224 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Prokr1Q9JKL1 393 aa13.33□□□□□ -0.27
Pdlim5-208ENSMUST00000196220 Usp34Q6ZQ93 3582 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Igkv18-36A0A075B5M9 114 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 1700024B05RikE9Q6D7 167 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Olfr726E9Q8X3 321 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Vmn2r44L7N2E1 861 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Cyp2j6O54750 501 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Fzd1O70421 642 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Prdx3P20108 257 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Alox15P39654 663 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Atp6v1b2P62814 511 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Olfr725Q05A45 321 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 LchnQ3UHG7 455 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Akap14Q3V0I7 536 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Lrrc47Q505F5 581 aaKnown RBP13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Fam160a1Q505K2 1081 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Galnt10Q6P9S7 603 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Magee1Q6PCZ4 918 aaKnown RBP13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Fam205cQ80YD3 371 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Stkld1Q80YS9 662 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 SgtaQ8BJU0 315 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Olfm2Q8BM13 448 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Suds3Q8BR65 328 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Peli3Q8BXR6 445 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 PigwQ8C398 503 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 TdrpQ8C5P7 182 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 NemfQ8CCP0 1064 aaKnown RBP13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Mtrf1Q8K126 446 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Ccdc71Q8VEG0 433 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Spg21Q9CQC8 308 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 P2yr13Q9D8I2 337 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Syvn1Q9DBY1 612 aa13.33□□□□□ -0.28
Pdlim5-208ENSMUST00000196220 Cyp2g1Q9WV19 494 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms