RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Gm6370A0A0G2JGX9 315 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Gm2888K7N746 267 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Gm6309L7N481 315 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Crabp2P22935 138 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Hspa4lP48722 838 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Cog7Q3UM29 770 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Mtmr12Q80TA6 747 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Btbd10Q80X66 475 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Pacs1Q8K212 961 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Fam129bQ8R1F1 749 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Vmn1r206Q8R277 312 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 TgdsQ8VDR7 355 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ska2Q9CR46 120 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Il20Q9JKV9 176 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 B9d1Q9R1S0 204 aa22.91■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Sypl1O09117 261 aa22.9■■□□□ 1.26
Upf3a-201ENSMUST00000043767 PtpaP58389 323 aa22.9■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Snx21Q3UR97 363 aa22.9■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Heatr9Q5QNV8 569 aa22.9■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Dclk2Q6PGN3 756 aa22.9■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Ssxb5Q6XAS2 159 aa22.9■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Aph1bQ8C7N7 257 aa22.9■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Cdyl2Q9D5D8 503 aa22.9■■□□□ 1.26
Upf3a-201ENSMUST00000043767 PllpQ9DCU2 182 aa22.9■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Tmem115Q9WUH1 350 aa22.9■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Slc8a3S4R2P9 928 aa22.9■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Cep290Q6A078 2472 aa22.9■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Glipr1l3A0A1W2P7V2 236 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Skint8A7XV07 398 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 MndalD0QMC3 538 aaKnown RBP22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 5730507C01RikJ3QPX0 416 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 GzmkO35205 263 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Grk4O70291 574 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Psmb4P99026 264 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 CamkmtQ3U2J5 323 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Tmem65Q4VAE3 234 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Atg16l2Q6KAU8 623 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Lrrtm3Q8BZ81 582 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Arhgap24Q8C4V1 747 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Kctd2Q8CEZ0 266 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 Mtm1Q9Z2C5 603 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 MycsQ9Z304 431 aa22.89■■□□□ 1.26
Upf3a-201ENSMUST00000043767 MipepA6H611 711 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Nxpe3B9EKK6 559 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Gm10718D3Z1I7 227 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Gm597E9Q8J5 896 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Gm4847G3X946 537 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Cyp4a14O35728 507 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Igf2bp1O88477 577 aaKnown RBP22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 PdgfaP20033 211 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Ntsr2P70310 416 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Mdga1Q0PMG2 940 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Yipf3Q3UDR8 347 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Taar8aQ5QD07 344 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Nfe2l1Q61985 741 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Nemp1Q6ZQE4 437 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Abi3Q8BYZ1 367 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Fmo9Q8C116 539 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Cyp2c70Q91W64 489 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Mccc1Q99MR8 717 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 AadacQ99PG0 398 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Slc29a1Q9JIM1 460 aa22.89■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Gm14781A2A9Q9 366 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Kifc5bE9PUA5 672 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Adamts14E9PX39 1209 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Tekt5G5E8A8 557 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Srpk1O70551 648 aaKnown RBP22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 PolP11369 1281 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Slc7a2P18581 657 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Pdcd2P46718 343 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Hsd17b4P51660 735 aaKnown RBP22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Ranbp9P69566 653 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Mageb5Q14AN0 366 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Tmc5Q32NZ6 967 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 ADGRF3Q58Y75 991 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Grb10Q60760 621 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Abcd2Q61285 741 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Zbtb33Q8BN78 671 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Suds3Q8BR65 328 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Ubap2Q91VX2 1132 aaKnown RBP22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Rpn2Q9DBG6 631 aaKnown RBP22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Adam21Q9JI76 729 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Ankrd34aB2RW11 495 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Vmn2r104E9Q2J5 860 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Gm8108K7N734 216 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Cdh16O88338 830 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Dnmt3cP0DOY1 709 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Kif5aP33175 1027 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Sult1e1P49891 295 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Crnkl1P63154 690 aaKnown RBP22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Nat9Q3UG98 241 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Stard3Q61542 446 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 SnrpaQ62189 287 aaKnown RBP22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Ptk6Q64434 451 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Scd4Q6T707 353 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Kansl1Q80TG1 1036 aaKnown RBP22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Klhl38Q8BSF5 581 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Ccdc68Q8BVC4 333 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Gpr21Q8BX79 349 aa22.88■■□□□ 1.25
Upf3a-201ENSMUST00000043767 Arfip2Q8K221 341 aa22.88■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms