RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Utp14bQ6EJB6 756 aaKnown RBP12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Galnt10Q6P9S7 603 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Smpd4Q6ZPR5 823 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fam107aQ78TU8 144 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 H2-Q4Q8HWB2 354 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Atg10Q8R1P4 215 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Q8R1Y2 203 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Olfr589Q8VGV8 317 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 MydgfQ9CPT4 166 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 NtpcrQ9CQA9 190 aaKnown RBP12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Alg14Q9D081 217 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Acer3Q9D099 267 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Paqr5Q9DCU0 330 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Jam2Q9JI59 298 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Hao2Q9NYQ2 353 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Dcun1d1Q9QZ73 259 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Trpc7Q9WVC5 862 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Il13ra1O09030 424 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Psme3P61290 254 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Smpdl3aP70158 445 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Pitx1P70314 315 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Eif2ak2Q03963 515 aaKnown RBP12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 IqcmQ149I8 489 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Mks1Q5SW45 561 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Ltbp3Q61810 1268 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Cyp2d40Q6P8N9 338 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Slc39a4Q78IQ7 660 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Mtmr12Q80TA6 747 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Arhgef38Q80VK6 770 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Chil6Q80W26 440 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Nat14Q8BVG8 206 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Q8CDN1 933 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Mfsd14bQ8CIA9 507 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Lgals12Q91VD1 314 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Fam192aQ91WE2 254 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 DenrQ9CQJ6 198 aaKnown RBP12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Actl7aQ9QY84 440 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Angptl2Q9R045 493 aa12.71□□□□□ -0.37
Rnf4-201ENSMUST00000030992 Vsig10l2A0A140LHF2 776 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Skint7A7XV04 395 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Kif6E9PX57 802 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Folr1P35846 255 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Gabrr2P56476 465 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Rps3P62908 243 aaKnown RBP12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Clec4fP70194 548 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Coq10bQ3THF9 240 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Zbtb16Q3UQ17 673 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 MyrfQ3UR85 1138 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Klhl14Q69ZK5 630 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Ubtd2Q6PGH0 234 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Gm7247Q6UY52 187 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Adam39Q7M762 756 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Gpr142Q7TQN9 365 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Clec18aQ7TSQ1 534 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Stx5Q8K1E0 355 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Dclre1cQ8K4J0 705 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Slc30a5Q8R4H9 761 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Slc35b2Q91ZN5 431 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Catsper1Q91ZR5 686 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Atoh8Q99NA2 322 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Borcs5Q9D920 195 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 AcadsbQ9DBL1 432 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Ampd2Q9DBT5 798 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Plagl1Q9JLQ4 704 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Wdr54Q9R0D8 334 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Ap4s1Q9WVL1 144 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Stau1Q9Z108 487 aaKnown RBP12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 RecqlQ9Z129 648 aa12.71□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Ccdc194A0A140LIT1 234 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Ism1A2ATD1 454 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 1700024B05RikE9Q6D7 167 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Zfp14P10755 501 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Gnao1P18872 354 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Hoxd8P23463 289 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 AdprhP54923 362 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Micall2Q3TN34 1009 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Clhc1Q5M6W3 596 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Nrg1Q6DR99 700 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Defb34Q7TNV8 81 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Gramd1bQ80TI0 738 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Zswim3Q8CFL8 695 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 KmoQ91WN4 479 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 DcxrQ91X52 244 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 4933425L06RikQ9D3Z8 585 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 IgtpQ9DCE9 423 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Ube4bQ9ES00 1173 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Slc2a5Q9WV38 501 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Sept5Q9Z2Q6 369 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Gm43518A0A0G2JGB6 165 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Gm21964A0A1W2P7S4 437 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Cilp2D3Z7H8 1162 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Gm3526E9PZM0 191 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Vmn2r10K7N621 847 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 P01878 344 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Acvr2bP27040 536 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Arpp19P56212 112 aaKnown RBP12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Rplp2P99027 115 aaKnown RBP12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Armcx5Q3UZB0 606 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Adam2Q60718 735 aa12.7□□□□□ -0.38
Rnf4-201ENSMUST00000030992 Slc6a3Q61327 619 aa12.7□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms