RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Gm6685D3YYP3 228 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ifit3bE9PV48 403 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm8369E9PZI3 166 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Srp72F8VQC1 671 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Patl1Q3TC46 770 aaKnown RBP16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Nol9Q3TZX8 714 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 B020004J07RikQ3UTC0 476 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Thoc5Q8BKT7 683 aaKnown RBP16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Smim11aQ99J19 55 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 PigxQ99LV7 254 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 CpqQ9WVJ3 470 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Vmn2r27D3YUK6 857 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 GzmkO35205 263 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Pde9aO70628 534 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Cd72P21855 354 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Lim2P56563 173 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Rab10P61027 200 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Kir3dl1P83555 432 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Pacs2Q3V3Q7 862 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Srek1ip1Q4V9W2 153 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Skiv2lQ6NZR5 1244 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Impg1Q8R1W8 798 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Alpk2Q91ZB0 2144 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Nudt7Q99P30 236 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ndufb5Q9CQH3 189 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 PclafQ9CQX4 110 aaKnown RBP16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ska2Q9CR46 120 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Snx29Q9D3S3 818 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 Mgea5Q9EQQ9 916 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 RhojQ9ER71 214 aa16.23■□□□□ 0.19
Trim28-201ENSMUST00000005705 6720489N17RikA0A1Y7VJW0 127 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Rrn3B2RS91 656 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ceacam3E9Q6J4 706 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Fbrsl1E9Q9T0 1031 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Dusp2Q05922 318 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 StyxQ60969 223 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Q6GQU0 248 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ces2bQ6PDB7 556 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Mtmr12Q80TA6 747 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ric8bQ80XE1 520 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 SvopQ8BFT9 548 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Stx5Q8K1E0 355 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Hip1Q8VD75 1029 aaKnown RBP16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Isoc1Q91V64 297 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 DarsQ922B2 501 aaKnown RBP16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Syvn1Q9DBY1 612 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Htr3bQ9JHJ5 437 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Sh3glb1Q9JK48 365 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Nt5cQ9JM14 200 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Trbv4A0A075B5I2 113 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Fam43bA2AM80 330 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm4871D3Z0W7 314 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 BdnfP21237 249 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Trpv5P69744 723 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Slc16a10Q3U9N9 512 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Slfn4Q3UV66 602 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Btnl1Q7TST0 509 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Trnau1apQ80VC6 287 aaKnown RBP16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Lrrc66Q8K0B3 872 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 NplQ9DCJ9 320 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Slco1c1Q9ERB5 715 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gfra4Q9JJT2 260 aa16.22■□□□□ 0.19
Trim28-201ENSMUST00000005705 Cyp4a12bA2A974 508 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Rhox6O70238 227 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 AldoaP05064 364 aaKnown RBP16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Map3k7clP58500 142 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 ZbbxQ0P5X5 716 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 PkdccQ5RJI4 492 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Uimc1Q5U5Q9 727 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Kcnh1Q60603 989 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Zdhhc17Q80TN5 632 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Trit1Q80UN9 467 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Lair1Q8BG84 263 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 NcaphQ8C156 731 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 PvrQ8K094 408 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Mtg1Q8R2R6 326 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Slc30a5Q8R4H9 761 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Cyp4a12aQ91WL5 508 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Dhrs7bQ99J47 323 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Snrpb2Q9CQI7 225 aaKnown RBP16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Spag6Q9JLI7 507 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Olfr671A0A1B0GSN5 317 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm3752A6NAT4 150 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Pate3B3GLJ3 98 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ptchd4B9EKX1 904 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm21293E9Q4G9 266 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Gm6614M0QWR8 670 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 TpmtO55060 240 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Dlx2P40764 332 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Stat5aP42230 793 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Olfr867Q7TRF3 331 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Ccdc116Q80X53 541 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Aldh4a1Q8CHT0 562 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Lrrc56Q8K375 552 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Dennd2dQ91VV4 469 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Vps11Q91W86 941 aaKnown RBP16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Slc22a7Q91WU2 540 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Tex13bQ99MW5 186 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Leng1Q9DB98 261 aa16.21■□□□□ 0.19
Trim28-201ENSMUST00000005705 Adam17Q9Z0F8 827 aa16.21■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 54.3 ms