RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 PolkQ9QUG2 852 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Chil5A0A0G2JDS2 431 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Olfr1049A2ARZ0 308 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Atp6v1e1P50518 226 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Smpdl3bP58242 456 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Npy2rP97295 381 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Aarsd1Q3THG9 412 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 LcorlQ3U285 600 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Gm136Q3V037 328 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Zfp280bQ505F4 534 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Sec22cQ8BXT9 303 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Parp12Q8BZ20 711 aaKnown RBP12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Spdye4bQ8CDE8 236 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Ugt2b34Q8K154 532 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Rnf8Q8VC56 488 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Olfr1414Q8VGU5 312 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Chst15Q91XQ5 561 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Slamf8Q9D3G2 278 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 2010109A12RikQ9D875 119 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Pidd1Q9ERV7 915 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Tsc22d3Q9Z2S7 137 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f15A0A087WR44 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f12A0A0A0MQP3 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Zfp626A0A0U1RQ84 676 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Gm5485A0A1D5RM98 91 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f9A2BFZ7 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f7A2BHG6 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f19A2CG71 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f10A2CG92 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f3A2CGC2 496 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f13B8JKF6 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f2J3QMS5 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f25J3QMV9 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f6J3QMW9 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f26J3QNK2 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f24J3QNQ5 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f8J3QQ50 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Gm6337K7N6X9 211 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f17L7MU81 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f18L7MU83 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Gm3115L7N285 211 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Slc6a20bO88575 635 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 ThbdP15306 577 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Mmp3P28862 477 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Kcnj6P48542 425 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Adra1dP97714 562 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Ebf1Q07802 591 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f14Q1LZI5 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Pag1Q3U1F9 429 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btbd35f27Q5FWA1 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 G2e3Q5RJY2 716 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cntn2Q61330 1040 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Mea1Q64327 174 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Vac14Q80WQ2 782 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 LppQ8BFW7 613 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Slco6c1Q8C0X7 706 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Parp9Q8CAS9 866 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Adgrg2Q8CJ12 1009 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Trpv3Q8K424 791 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Slc6a20aQ8VDB9 592 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Arhgef3Q91X46 524 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Stard13Q923Q2 1113 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Lysmd3Q99LE3 305 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 GMCL1P1Q99N64 498 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Lrrc4Q99PH1 652 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Klhl28Q9CR40 571 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Sesn3Q9CYP7 492 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Acbd6Q9D061 282 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Tex22Q9D9U4 189 aa12.75□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Rgs4O08899 205 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Got2P05202 430 aaKnown RBP12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cd86P42082 309 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 MtpnP62774 118 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cdh9P70407 786 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Htr1aQ64264 421 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 ErfeQ6PGN1 340 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Tmcc2Q80W04 706 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Scn3bQ8BHK2 215 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Vps37aQ8CHS8 397 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 BroxQ8K2Q7 411 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Olfr589Q8VGV8 317 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Socs7Q8VHQ2 579 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Tas1r1Q99PG6 842 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Fbxo32Q9CPU7 355 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Hspa12bQ9CZJ2 685 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Timm50Q9D880 353 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 1700080O16RikQ9D9G4 284 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Rpl38Q9JJI8 70 aaKnown RBP12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Rgs1Q9JL25 209 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 FanceB8JJD6 213 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 TpteG5E8H5 664 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Mup13L7N222 235 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Axin1O35625 863 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Asna1O54984 348 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Hcn3O88705 779 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Cd4P06332 457 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Hoxc13P50207 328 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btg1-ps1Q3V0S2 161 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Btg1-ps2Q3V0X0 161 aa12.74□□□□□ -0.37
Clcn3-201ENSMUST00000004430 Mpzl3Q3V3F6 237 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 39.4 ms