RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 CNGA3Q16281 694 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 ANKRD20A4Q4UJ75 823 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 SPANXN3Q5MJ09 141 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 BEND6Q5SZJ8 279 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-230ENST00000641927 UBAP2Q5T6F2 1119 aaKnown RBP17.48■□□□□ 0.39
PHGDH-230ENST00000641927 ESRP1Q6NXG1 681 aaKnown RBP17.48■□□□□ 0.39
PHGDH-230ENST00000641927 TMEM135Q86UB9 458 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.48■□□□□ 0.39
PHGDH-230ENST00000641927 OR13C4Q8NGS5 318 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 OR14C36Q8NHC7 312 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 UHMK1Q8TAS1 419 aaKnown RBP17.48■□□□□ 0.39
PHGDH-230ENST00000641927 DNAJC1Q96KC8 554 aaKnown RBP17.48■□□□□ 0.39
PHGDH-230ENST00000641927 FCRL3Q96P31 734 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-230ENST00000641927 PPANQ9NQ55 473 aaKnown RBP17.48■□□□□ 0.39
PHGDH-230ENST00000641927 FADS3Q9Y5Q0 445 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 PRR23AA6NEV1 266 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 FAM47DPA6NHR8 397 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 DYNC1I1O14576 645 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 AREL1O15033 823 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 SPINT1O43278 529 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 RIPK2O43353 540 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 APBB3O95704 486 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 ZNF30P17039 623 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 PAMP19021 973 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 AOC1P19801 751 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 PHBP35232 272 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 HSD17B3P37058 310 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 MAGEA9P43362 315 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 CXCL12P48061 93 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 PXNP49023 591 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-230ENST00000641927 TPMTP51580 245 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 ZNF140P52738 457 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-230ENST00000641927 GPX6P59796 221 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 PTSQ03393 145 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 RALGDSQ12967 914 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 CDKN3Q16667 212 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 ARMC3Q5W041 872 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 USP30Q70CQ3 517 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 KBTBD6Q86V97 674 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 GSDMBQ8TAX9 411 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 CXorf40AQ8TE69 158 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 STYXQ8WUJ0 223 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 EID2BQ96D98 161 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 IER2Q9BTL4 223 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 CD93Q9NPY3 652 aa17.48■□□□□ 0.39
PHGDH-230ENST00000641927 SPATA6Q9NWH7 488 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-230ENST00000641927 PAPSS2O95340 614 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-230ENST00000641927 LIG3P49916 1009 aa17.47■□□□□ 0.39
PHGDH-230ENST00000641927 CCR3P51677 355 aa17.47■□□□□ 0.39
PHGDH-230ENST00000641927 TAS2R38P59533 333 aa17.47■□□□□ 0.39
PHGDH-230ENST00000641927 PRAMEP78395 509 aa17.47■□□□□ 0.39
PHGDH-230ENST00000641927 SLC29A2Q14542 456 aa17.47■□□□□ 0.39
PHGDH-230ENST00000641927 ACOX1Q15067 660 aa17.47■□□□□ 0.39
PHGDH-230ENST00000641927 OR13J1Q8NGT2 312 aa17.47■□□□□ 0.39
PHGDH-230ENST00000641927 TPSD1Q9BZJ3 242 aa17.47■□□□□ 0.39
PHGDH-230ENST00000641927 TREX1Q9NSU2 369 aa17.47■□□□□ 0.39
PHGDH-230ENST00000641927 NLE1Q9NVX2 485 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-230ENST00000641927 IL1RAPL1Q9NZN1 696 aa17.47■□□□□ 0.39
PHGDH-230ENST00000641927 FZD4Q9ULV1 537 aa17.47■□□□□ 0.39
PHGDH-230ENST00000641927 FAM169AQ9Y6X4 670 aa17.47■□□□□ 0.39
PHGDH-230ENST00000641927 SLC7A4O43246 635 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 TSPAN6O43657 245 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 MMP20O60882 483 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 SPAG6O75602 509 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 VAPBO95292 243 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 CLCN5P51795 746 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 TMEM31Q5JXX7 168 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 STEAP4Q687X5 459 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 LIPIQ6XZB0 460 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 HSD11B1LQ7Z5J1 315 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 UNC5BQ8IZJ1 945 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 OR6P1Q8NGX9 317 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 HDAC10Q969S8 669 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 PLAC1Q9HBJ0 212 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 ITM2CQ9NQX7 267 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 C20orf96Q9NUD7 363 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-230ENST00000641927 PKD2L2Q9NZM6 624 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 IL17CQ9P0M4 197 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 DLGAP2Q9P1A6 1054 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 EBF1Q9UH73 591 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 CYP8B1Q9UNU6 501 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 TECTAO75443 2155 aa17.46■□□□□ 0.39
PHGDH-230ENST00000641927 TBC1D3DA0A087WVF3 549 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 TBC1D3IA0A087WXS9 549 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 TBC1D3EA0A087X179 549 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 TBC1D3KA0A087X1G2 549 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 ZCWPW2A0A1B0GU75 182 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 TCRBV9S1A1TA0A576 114 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 TBC1D3FA6NER0 549 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-230ENST00000641927 TBC1D3LB9A6J9 549 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 GOLGA8KD6RF30 607 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 H0Y858 1186 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 GOLGA8TH3BQL2 631 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 PLRG1O43660 514 aaKnown RBP17.45■□□□□ 0.38
PHGDH-230ENST00000641927 AP1G1O43747 822 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 LZTS3O60299 673 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-230ENST00000641927 RPP40O75818 363 aaKnown RBP17.45■□□□□ 0.38
PHGDH-230ENST00000641927 GSTA2P09210 222 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 C1SP09871 688 aa17.45■□□□□ 0.38
PHGDH-230ENST00000641927 TBC1D3HP0C7X1 549 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms