RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CTSOP43234 321 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-216ENST00000641375 LIG3P49916 1009 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 ECT2LQ008S8 904 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 LACTB2Q53H82 288 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-216ENST00000641375 HECTD2Q5U5R9 776 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 PPP2R2DQ66LE6 453 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 LDB1Q86U70 411 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-216ENST00000641375 CRLF3Q8IUI8 442 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 CENPLQ8N0S6 344 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-216ENST00000641375 RYBPQ8N488 228 aaPredicted RBP16.45■□□□□ 0.22
PHGDH-216ENST00000641375 OR6K2Q8NGY2 324 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 PIH1D2Q8WWB5 315 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 RMDN2Q96LZ7 410 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 TUBGCP5Q96RT8 1024 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 NDNQ99608 321 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 C19orf43Q9BQ61 176 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 VPS9D1Q9Y2B5 631 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 PKP3Q9Y446 797 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 LAMA3Q16787 3333 aa16.45■□□□□ 0.22
PHGDH-216ENST00000641375 H7C0S8 307 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 H2AFYO75367 372 aaKnown RBP16.44■□□□□ 0.22
PHGDH-216ENST00000641375 RALBP11234 206 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 HMGCLP35914 325 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 CCDC15Q0P6D6 951 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 ZNF460Q14592 562 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 SETDB1Q15047 1291 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 RAB30Q15771 203 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 FAM83EQ2M2I3 478 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-216ENST00000641375 C22orf39Q6P5X5 142 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 ZCCHC23Q6ZST2 131 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 AHI1Q8N157 1196 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 TTC30BQ8N4P2 665 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 PCDH20Q8N6Y1 951 aaKnown RBP16.44■□□□□ 0.22
PHGDH-216ENST00000641375 PAF1Q8N7H5 531 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 C12orf76Q8N812 135 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-216ENST00000641375 KCTD4Q8WVF5 259 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 TNKS2Q9H2K2 1166 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 ABCF3Q9NUQ8 709 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 DZANK1Q9NVP4 752 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 ZNF711Q9Y462 761 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 C2orf16Q68DN1 1984 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 RANBP2P49792 3224 aaKnown RBP16.44■□□□□ 0.22
PHGDH-216ENST00000641375 G3V2L1 256 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 PIGNO95427 931 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 SLC4A1P02730 911 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 MYL2P10916 166 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 SLC26A3P40879 764 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 STK19P49842 368 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-216ENST00000641375 RAD51Q06609 339 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.44■□□□□ 0.22
PHGDH-216ENST00000641375 PPP2R3CQ969Q6 453 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 SCYL1Q96KG9 808 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 OLFM1Q99784 485 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 GPR63Q9BZJ6 419 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 ACTR5Q9H9F9 607 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-216ENST00000641375 GPAMQ9HCL2 828 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 POLR3BQ9NW08 1133 aaPredicted RBP16.44■□□□□ 0.22
PHGDH-216ENST00000641375 CRYL1Q9Y2S2 319 aa16.44■□□□□ 0.22
PHGDH-216ENST00000641375 A0A0J9YYE9 177 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 TRBC1P01850 177 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 DLDP09622 509 aaKnown RBP16.43■□□□□ 0.22
PHGDH-216ENST00000641375 SLC1A6P48664 564 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 PRKAA2P54646 552 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 KCNC3Q14003 757 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 ACCSLQ4AC99 568 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 AGAP9Q5VTM2 703 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 LRRC8EQ6NSJ5 796 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 KIAA0907Q7Z7F0 614 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-216ENST00000641375 FSTL5Q8N475 847 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-216ENST00000641375 GIMAP7Q8NHV1 300 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 OSCP1Q8WVF1 389 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 LRRC37BQ96QE4 947 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 SMIM14Q96QK8 99 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 CPEB1Q9BZB8 566 aaKnown RBP16.43■□□□□ 0.22
PHGDH-216ENST00000641375 NKX2-4Q9H2Z4 354 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 DUS2Q9NX74 493 aaKnown RBP16.43■□□□□ 0.22
PHGDH-216ENST00000641375 HECAQ9UBI9 543 aaPredicted RBP16.43■□□□□ 0.22
PHGDH-216ENST00000641375 DCTN4Q9UJW0 460 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 CDH23Q9H251 3354 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 A0A0G2JND7 137 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 TRIM13O60858 407 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 POLR2EP19388 210 aaKnown RBP16.43■□□□□ 0.22
PHGDH-216ENST00000641375 TTPAP49638 278 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 ARFIP2P53365 341 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 ITGA9Q13797 1035 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 SEMA3AQ14563 771 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 MYLK3Q32MK0 819 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 AARS2Q5JTZ9 985 aaKnown RBP16.43■□□□□ 0.22
PHGDH-216ENST00000641375 CES4AQ5XG92 561 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 KLC3Q6P597 504 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 ZYG11AQ6WRX3 759 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 ADIPOR2Q86V24 386 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 FITM2Q8N6M3 262 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 PPP4R1Q8TF05 950 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 GDPD5Q8WTR4 605 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 NXNL1Q96CM4 212 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 GPR78Q96P69 363 aa16.43■□□□□ 0.22
PHGDH-216ENST00000641375 MRPL57Q9BQC6 102 aaKnown RBP16.43■□□□□ 0.22
PHGDH-216ENST00000641375 SIKE1Q9BRV8 207 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms